Job Description P77360 Confidence 100.00% Date Wed Jan 25 15:21:11 GMT 2012 Rank 4 Aligned Residues 343 % Identity 24% Template c1ma0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione-dependent formaldehyde dehydrogenase; PDBTitle: ternary complex of human glutathione-dependent formaldehyde2 dehydrogenase with nad+ and dodecanoic acid Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		M	K	T	M	L	A	A	Y	L	P	G	N	.	S	T	V	D	L	R	E	V	A	V	P	T	P	G	I	N	Q	V	L	I	K	M	K	S	S	G	I	C	G	S	D	V	H	Y	I	Y	H	Q	H	R	A	T	A	A	A	P	D	K	P	L	Y	Q	G	F	I	N	G	H	E	P	C	G	Q	I	V	A	M
Query Conservation														.
Alig confidence														.																																												.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		V	I	K	C	K	A	A	V	A	W	E	A	G	K	P	L	S	I	E	E	I	E	V	A	P	P	K	A	H	E	V	R	I	K	I	I	A	T	A	V	C	H	T	D	A	Y	T	L	S	G	A	D	P	E	G	C	.	.	.	.	.	.	.	.	F	P	V	I	L	G	H	E	G	A	G	I	V	E	S	V
Template Known Secondary structure										B		S	T	T	S														T	T																					T			T	T			.	.	.	.	.	.	.	.	S	S	B
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	G	C	R	H	F	K	E	G	D	R	V	L	V	Y	H	I	S	G	C	G	F	C	P	N	C	R	R	G	F	P	I	S	C	T	G	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Y	G	W	Q	R	D	G	G	H	A	E	Y	L	L	A	E	E	K	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	G	V	T	K	L	K	A	G	D	T	V	I	P	L	Y	I	P	Q	C	G	E	C	K	F	C	L	N	P	K	T	N	L	C	Q	K	I	R	V	T	Q	G	K	G	L	M	P	D	G	T	S	R	F	T	C	K	G	K	T	I	L	H	Y	M	G	T	S	T	F	S	E	Y	T	V	V	A	D	I	S
Template Known Secondary structure			T	T			S			T	T							S	S				S	S	S	T	T	T	T		T	T						T	T						T	T			T	T	S			S				T	T				B			T	T	T			S	B	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	I	L	L	P	D	A	L	S	Y	E	D	G	A	F	I	S	C	G	V	G	T	A	Y	E	G	I	.	L	R	G	E	V	S	G	S	D	N	V	L	V	V	G	L	G	P	V	G	M	M	A	M	M	L	A	K	G	R	G	A	K	R	I	I	G	V	D	M	L	P	E	R	L	A	M	A	K	Q	L	G
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		V	A	K	I	D	P	L	A	P	L	D	K	V	C	L	L	G	C	G	I	S	T	G	Y	G	A	A	V	N	T	A	K	L	E	P	G	S	V	C	A	V	F	G	L	G	G	V	G	L	A	V	I	M	G	C	K	V	A	G	A	S	R	I	I	G	V	D	I	N	K	D	K	F	A	R	A	K	E	F	G
Template Known Secondary structure							T	T	S						G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G								T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure															.																																																							.	.
Query SS confidence															.																																																							.	.
Query Sequence		V	M	D	H	G	Y	L	A	T	T	E	G	L	.	P	Q	I	I	A	E	L	T	H	G	G	A	D	V	A	L	D	C	S	G	N	A	A	G	R	L	L	A	L	Q	S	T	A	D	W	G	R	V	V	Y	I	G	E	T	G	K	V	E	F	E	V	S	A	D	.	.	L	M	H	H	Q	R	R	I	I	G
Query Conservation															.																																																							.	.
Alig confidence															.																																																							.	.
Template Conservation
Template Sequence		A	T	E	C	I	N	P	Q	D	F	S	K	P	I	Q	E	V	L	I	E	M	T	D	G	G	V	D	Y	S	F	E	C	I	G	N	V	K	V	M	R	A	A	L	E	A	C	H	K	G	W	G	V	S	V	V	V	G	V	A	A	S	G	E	E	I	A	T	R	P	F	Q	L	V	T	G	R	T	W	K	G
Template Known Secondary structure			S					G	G	G		S	S											T	S		B	S						S												T	B		T	T	T							S				T	T							T					T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		297	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		S	W	V	T	S	.	.	.	L	F	H	M	E	K	C	A	H	D	L	T	D	W	K	L	W	P	R	N	A	I	T	H	R	F	S	L	E	Q	A	G	D	A	Y	A	L	M	A	S	G	K	C	G	K	V	V	I	N	F
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		T	A	F	G	G	W	K	S	V	E	S	V	P	K	L	V	S	E	Y	M	S	K	K	I	K	V	D	E	F	V	T	H	N	L	S	F	D	E	I	N	K	A	F	E	L	M	H	S	G	K	S	I	R	T	V	V	K	I
Template Known Secondary structure			S	G	G	G																T	T	S	S			G	G	G							G	G	G										T	T			S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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