Job Description P0ACR4 Confidence 50.14% Date Thu Jan 5 11:18:48 GMT 2012 Rank 298 Aligned Residues 197 % Identity 10% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		A	I	R	I	Y	A	S	S	T	I	G	N	Y	I	L	P	A	V	I	A	R	Y	R	H	D	Y	P	Q	L	P	I	E	L	S	V	G	N	S	Q	D	V	M	Q	A	V	L	D	F	R	V	D	I	G	F	I	E	G	P	C	H	S	T	E	I	I	.	.	S	E	P	W	L	E	D	E	L	V	V	F	A
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		X	V	R	V	G	T	I	A	G	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	I	V	S	I	G	K	T	F	V
Template Known Secondary structure									T	T																											S		T	T	S							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	T	S	P	L	A	R	G	P	V	T	L	E	Q	L	A	A	A	P	W	I	L	R	E	R	G	S	G	T	R	E	I	V	D	Y	L	L	L	S	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	E	M	A	M	E	L	G	N	S	E	A	I	K	H	A	V	R	H	G
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	X	G	L	Y	S	K	K	I	T	A	L	T	Q	L	K	T	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K	I	V	E	L	D	A	A	Q	L	S	R	S	L	G	D
Template Known Secondary structure									S	S		S	S	G	G	G			T	T								S														T	T	S											G	G	G					T	T									G	G	G	G	G	G		T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	I	S	C	L	S	R	R	V	I	E	D	Q	L	Q	A	G	T	L	S	E	V	A	V	P	L	P	R	L	M	R	T	L	W	R	I	H	H	R	Q	K	H	L	S	N	A	L	R	R	F	L	D	Y	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	D	P	R	L	K	Q	L	V	S	A	L
Template Known Secondary structure			S										G	G	G	T			T	T	T	T		S					S	S	S	S									G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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