 |
Job Description | P0ACR4 | Confidence | 38.18% | Date | Thu Jan 5 11:18:48 GMT 2012 |
Rank | 338 | Aligned Residues | 48 |
% Identity | 23% | Template | c3lwfD_ |
PDB info |
PDB header:transcription regulator | Chain: D: PDB Molecule:putative transcriptional regulator; |
PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution
|
Resolution | 2.06 Å |
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | V | F | A | E | V | L | K | S | G | . |
. |
. |
. |
. |
S | T | T | Q | A | S | V | M | L | A | L | S | Q | S | A | V | S | A | A | L | T | D | L | E | G | Q | L | G | V | Q | L | F | D | R | V | G | K | R |
Query Conservation |   |
|   |   |
|   |
|
|
|   |   |
| . | . | . | . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   | . |
|
|
|
|   |
|   |
|
|   |   |
|
Template Sequence |   |
L | T | I | T | L | E | L | A | K | R | I | G | D | G | P | I | S | L | R | S | I | A | Q | D | K | N | L | S | E | H | Y | L | E | Q | L | I | G | P | L | R | N | . |
A | G | I | V | K | S | I | R | G | A | H | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T | S |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T | S |  |  |  |  |
| S | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|