Job Description P0ACR4 Confidence 26.67% Date Thu Jan 5 11:18:48 GMT 2012 Rank 369 Aligned Residues 197 % Identity 9% Template c3hn0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution Resolution 1.75 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	I	R	I	Y	A	S	S	T	I	G	N	Y	I	L	P	A	V	I	A	R	Y	R	H	D	Y	P	Q	L	P	I	E	L	S	V	G	N	S	Q	D	V	M	Q	A	V	L	D	F	R	V	D	I	G	F	I	E	G	P	C	H	S	T	E	I	I	S	E	P	W	L	E	D	E	L	V	V	F	A
Query Conservation
Alig confidence																																																										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		D	T	V	I	K	V	S	V	L	R	G	P	S	V	I	A	F	A	D	W	L	E	N	P	P	I	I	D	N	K	K	V	Q	V	K	V	V	D	S	P	D	L	A	Q	A	L	L	I	K	Q	E	T	D	I	A	V	.	.	.	.	.	L	P	X	I	N	A	A	N	L	Y	N	K	G	I	K	I	K	L	A
Template Known Secondary structure											S	S	T					T						S					T	T									S											T	T			S				.	.	.	.	.												T	T		S
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		A	P	T	S	P	L	A	R	G	P	V	T	L	E	Q	L	A	A	A	P	W	I	L	R	E	R	G	S	G	T	R	E	I	V	D	Y	L	L	L	S	H	L	P	K	F	E	M	A	M	E	L	G	N	S	E	A	I	K	H	A	V	R	H	G	L	G	.	I	S	C	L	S	R	R	V	I	E	D	Q	L
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		G	C	P	I	W	G	T	L	Y	L	V	E	K	T	P	L	K	E	P	A	L	Y	V	F	G	N	G	T	T	P	D	I	L	T	R	Y	Y	L	G	R	Q	R	L	D	Y	P	L	N	Y	A	F	N	T	A	G	E	I	T	Q	G	I	L	A	G	K	V	N	R	A	V	L	G	E	P	F	L	S	I	A	L
Template Known Secondary structure															S	S			S						S	S	T	T	S														T								S			S											T	S		S						T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		247			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																										.	.	.
Query SS confidence			.	.																										.	.	.
Query Sequence		Q	.	.	A	G	T	L	S	E	V	A	V	P	L	P	R	L	M	R	T	L	W	R	I	H	H	R	Q	.	.	.	K	H	L	S	N	A	L	R	R	F	L	D	Y	C	D	P	A
Query Conservation			.	.																										.	.	.
Alig confidence			.	.																										.	.	.
Template Conservation
Template Sequence		R	K	D	S	S	L	R	I	T	A	D	L	N	H	L	T	D	N	D	T	L	G	F	A	Q	T	A	V	V	Y	T	P	T	X	E	K	Y	R	I	A	F	E	D	A	L	R	A	S
Template Known Secondary structure					T	T										S	S	T	T		S	S											G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions