 |
Job Description | P67699 | Confidence | 99.19% | Date | Thu Jan 5 12:10:48 GMT 2012 |
Rank | 41 | Aligned Residues | 61 |
% Identity | 15% | Template | d2o38a1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| NE1354
|
Resolution | 1.83 |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | D | I | I | Q | E | S | L | D | E | L | N | V | S | L | R | E | F | A | R | A | M | E | I | A | P | S | T | A | S | R | L | L | T | G | K | . |
A | A | L | T | P | E | M | A | I | K | L | S | V | V | I | G | S | S | P | Q | M | W | L | N |
Query Conservation |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|   |   |   |
|
|   |
|
|   |
|   | . |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
L | A | Y | A | L | N | A | V | I | D | R | A | R | L | S | Q | A | A | A | A | A | R | L | G | I | N | Q | P | K | V | S | A | L | R | N | Y | K | L | E | G | F | S | V | E | R | L | X | T | L | L | N | A | L | D | Q | D | V | E | I | V | I | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|