Return to main results Retrieve Phyre Job Id

Job DescriptionP67699
Confidence91.45%DateThu Jan 5 12:10:48 GMT 2012
Rank94Aligned Residues34
% Identity21%Templatec3mkzU_
PDB info PDB header:dna-binding protein/dnaChain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10......... 20.........30.........40...
Predicted Secondary structure  .






Query SS confidence 









.























Query Sequence  GDIIQESLDE. LNVSLREFARAMEIAPSTASRLLT
Query Conservation 
  

  
  . 



 


   


   

 

 
Alig confidence 









.























Template Conservation 
  
   
      

  

   
 


 


 

Template Sequence  GQRYASRLQNEFAGNISALADAENISRKIITRCIN
Template Known Secondary structure  TT
TTT

Template Predicted Secondary structure 







Template SS confidence 


































   164.....170.........180.........190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions