Job Description P67699 Confidence 92.63% Date Thu Jan 5 12:10:48 GMT 2012 Rank 85 Aligned Residues 82 % Identity 21% Template c3mkyP_ PDB info PDB header:dna binding protein/dna Chain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form Resolution 2.86 Å

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		10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	I	I	Q	E	S	L	D	E	.	L	N	V	S	L	R	E	F	A	R	A	M	E	I	A	P	S	T	A	S	R	L	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	A	A	L	T	P	E	M	A	I	K	L	S	V	V	I	G	S	S	P	Q	M	W	L	N	L	Q	N	A	W	S
Query Conservation												.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																									.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																																																																												.	.
Template Sequence		G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N	T	A	K	L	P	K	S	V	V	A	L	F	S	H	P	G	E	L	S	A	R	S	G	D	A	L	Q	K	A	F	T	D	K	E	E	L	L	K	Q	.	.	Q	A	S	N
Template Known Secondary structure											T	T	T	T	T										T	S													T	S							T	S	S	S	G	G	G	S												T	T	T								.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.
		76	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		L	A	E	A	E	K	T	.	.	.	V	D	V	S	R	L	R	R	L	V	T
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		L	H	E	Q	K	K	A	G	V	I	F	E	A	D	E	V	I	T	L	L	T
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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