 |
| Job Description | P67699 | | Confidence | 59.14% | Date | Thu Jan 5 12:10:48 GMT 2012 |
| Rank | 343 | Aligned Residues | 24 |
| % Identity | 8% | Template | c1l9uH_ |
| PDB info |
PDB header:transcription | Chain: H: PDB Molecule:sigma factor siga; |
PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution
|
| Resolution | 4.00 Å |
|
| | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
| Predicted Secondary structure | |
|
|
|
|  | | | | | | | | |
|
| | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | N | V | S | L | R | E | F | A | R | A | M | E | I | A | P | S | T | A | S | R | L | L | T |
| Query Conservation | |
|
|
|
|
| |
|
|
| | | |
|
|
| | | |
|
| |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
|
| |
|
|
| | |
|
|
|
| |
|
|
|
|
|
|
| |
| Template Sequence | |
R | E | H | T | L | E | E | V | G | A | Y | F | G | V | T | R | E | R | I | R | Q | I | E | N |
| Template Known Secondary structure | |
|
|
|
| | | | | | T | T | S |
| S |
| | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
