Job Description P39286 Confidence 99.00% Date Thu Jan 5 11:58:58 GMT 2012 Rank 35 Aligned Residues 139 % Identity 17% Template c3qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf Resolution 2.99 Å

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		32	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		D	D	N	L	F	G	E	P	D	E	G	.	.	.	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	G	D	V	H	R	C	N	I	R	R	T	I	R	S	L	V	T	G	D	R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T
Query Conservation													.	.	.
Alig confidence													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	V	V	A	G	R	R	N	V	G	K	S	S	F	M	N	A	L	V	G	T	D	P	V	Y	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	L	H	P	I	G	P	V	T	L	V	D	T	P	G	L	D	D	V	G	E	L	G	R	L	R	V	E
Template Known Secondary structure								S		S	T	T	T	T	T	T	T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T									S	S	T	T				T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	F	Y	D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L
Query Conservation
Alig confidence			.	.	.	.	.	.																					.	.	.																																									.	.	.
Template Conservation			.	.	.	.	.	.																					.	.	.																																									.	.	.
Template Sequence		K	.	.	.	.	.	.	A	R	R	V	F	Y	R	A	D	C	G	I	L	V	T	D	S	A	P	T	.	.	.	P	Y	E	D	D	V	V	N	L	F	K	E	M	E	I	P	F	V	V	V	V	N	K	I	D	V	L	G	E	K	A	E	E	L	K	G	L	Y	E	S	.	.	.	R	Y	E	A	K	V	L
Template Known Secondary structure			.	.	.	.	.	.						T	S		S							S	S	S			.	.	.													T	T											T	T	T	T				T						S	S		.	.	.		T	T
Template Predicted Secondary structure			.	.	.	.	.	.																					.	.	.																																									.	.	.
Template SS confidence
		81							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	S	S	H	T	Q	D	G	L	K	P	L	E	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	S	A	L	Q	K	K	G	F	D	D	I	G	K	T	I
Template Known Secondary structure				S	S			T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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