 |
Job Description | P39286 | Confidence | 94.92% | Date | Thu Jan 5 11:58:58 GMT 2012 |
Rank | 457 | Aligned Residues | 84 |
% Identity | 19% | Template | c3ohmA_ |
PDB info |
PDB header:signaling protein / hydrolase | Chain: A: PDB Molecule:guanine nucleotide-binding protein g(q) subunit alpha; |
PDBTitle: crystal structure of activated g alpha q bound to its effector2 phospholipase c beta 3
|
Resolution | 2.70 Å |
|
 |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
N | I | D | Q | I | V | I | V | S | A | I | L | P | . |
. |
. |
. |
. |
. |
. |
E | L | S | L | N | I | I | D | R | Y | L | V | A | C | E | T | . |
. |
. |
. |
. |
. |
. |
L | Q | I | E | P | I | I | V | L | N | K | I | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L |
Query Conservation |   |
|
|
|   |
|
|
|
|   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
N | V | T | S | I | M | F | L | V | A | L | S | E | Y | D | Q | V | L | V | E | S | D | N | E | N | R | M | E | E | S | K | A | L | F | R | T | I | I | T | Y | P | W | F | Q | N | S | S | V | I | L | F | L | N | K | K | D | L | L | E | E | K | I | M | Y | S | H | L | V | D | Y | F | P | E | Y | D | G | P | Q | R | D |
Template Known Secondary structure |   |
S |
| S |  |  |  |  |  |  |  | G | G | G | G | G |
| B |
| S | S |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | G | G | G | T | T |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | T | T | T | S |
| G | G | G | T |
| T | T |
|
| S |
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . |
  |
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | D | E | G | M | A | F | V | N | E | Q | M | D | I | Y | . |
. |
. |
R | N | I | G | Y | R | V | L | M | V | S | S | H | T | Q | D | G | L | K | P | L | E | E | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . |   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
A | Q | A | A | R | E | F | I | L | K | M | F | V | D | L | N | P | D | S | D | K | I | I | Y | S | H | F | T | C | A | T | D | T | E | N | I | R | F | V | F | A | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| T | T | T | T | S |
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|