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Job DescriptionP39286
Confidence98.18%DateThu Jan 5 11:58:58 GMT 2012
Rank103Aligned Residues85
% Identity19%Templatec3mmpC_
PDB info PDB header:transferaseChain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.... .....160..... ....170......... 180.........190.
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Query Sequence  AANIDQIVIVSAILPELSLNIIDRYLVACETLQIE. PIIVLNKIDLL. DDEGMAFVNEQMDI. . . . . . YRNIGYRVLMVS
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Template Sequence  AAQMDGAILVVAATDGPMP. QTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGS
Template Known Secondary structure  S


STTT


T.TTT
S

GGG


TTS
GGG



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   1095....1100.........1110... ......1120.........1130.........1140.........1150.........1160.........1170...
 
   192... ....200.....
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Query Sequence  SHTQ. . . . . . . . DGLKPLEEAL
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Template Sequence  ALKALEGDAEWEAKILELAGFL
Template Known Secondary structure  T
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   1174.....1180.........1190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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