Job Description P39286 Confidence 97.87% Date Thu Jan 5 11:58:58 GMT 2012 Rank 130 Aligned Residues 75 % Identity 13% Template c3mcaA_ PDB info PDB header:translation regulation/hydrolase Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay Resolution 2.74 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.								.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																		.												.	.																			.	.	.	.	.	.	.
Query SS confidence																																		.												.	.																			.	.	.	.	.	.	.
Query Sequence		I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	.	P	I	I	V	L	N	K	I	D	L	L	.	.	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	.	.	.	.	.	.	.	G	Y	R	V	L	M	V	S	S
Query Conservation																																		.												.	.																			.	.	.	.	.	.	.
Alig confidence																						.												.												.	.																			.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		V	D	S	S	Q	N	N	F	E	R	G	F	L	E	N	G	Q	T	R	E	.	H	A	Y	L	L	R	A	L	G	I	S	E	I	V	V	S	V	N	K	L	D	L	M	S	W	S	E	D	R	F	Q	E	I	K	N	I	V	S	D	F	L	I	K	M	V	G	F	K	T	S	N	V	H	F	V	P	I	S	A
Template Known Secondary structure									S	S	T	T	S		S		S	S				.								S	S											G	G	G	G	T	T																	T	T	T	S				G	G	G								S
Template Predicted Secondary structure																						.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		193	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	Q	D	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	G	T	N	L
Template Known Secondary structure		S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions