Job Description P39286 Confidence 99.08% Date Thu Jan 5 11:58:58 GMT 2012 Rank 27 Aligned Residues 150 % Identity 16% Template c3izyP_ PDB info PDB header:rna, ribosomal protein Chain: P: PDB Molecule:translation initiation factor if-2, mitochondrial; PDBTitle: mammalian mitochondrial translation initiation factor 2 Resolution 10.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		Y	D	D	N	L	F	G	E	P	D	E	G	.	.	.	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	G	D	V	H	R	C	N	I	R	R	T	I	R	S	L	V	T	G	D	R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L
Query Conservation														.	.	.
Alig confidence														.	.	.																													.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		P	V	V	T	I	M	G	H	V	D	H	G	K	T	T	L	L	D	K	L	R	K	T	Q	V	A	A	M	E	A	G	G	I	T	Q	H	I	G	A	F	L	V	S	.	.	.	.	.	.	.	.	.	.	.	L	P	S	G	E	K	I	T	F	L	D	T	P	G	.	.	.	.	.	H	A	A	F	S	A	M
Template Known Secondary structure			B						S	T	T	T	T																S	S	S			B				T	T	S			B		.	.	.	.	.	.	.	.	.	.	.	S	S		S	S			B					S	S	.	.	.	.	.	S			T	T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		T	R	P	D	F	Y	D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																								.																																									.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																								.
Template Sequence		R	A	R	G	.	.	.	.	.	.	.	.	T	Q	V	T	D	I	V	I	L	V	V	A	A	D	D	G	V	M	K	Q	T	V	E	.	S	I	Q	H	A	K	D	A	H	V	P	I	V	L	A	I	N	K	C	D	K	A	E	A	D	P	E	K	V	K	K	E	L	L	A	Y	D	V	V	C	E	D	Y	G
Template Known Secondary structure		B	B	S	S	.	.	.	.	.	.	.	.	S	B	S	B	S	S						B	S	S	S									.							T	T	T								B	S	G	G	G	T	T	T	S			S	S	S	S					T	T	S					S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																								.
Template SS confidence
		245	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
			184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	Y	R	V	L	M	V	S	S	H	T	Q	D	G	L	K	P	L	E	E	A	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	D	V	Q	A	V	H	V	S	A	L	T	G	E	N	M	M	A	L	A	E	A	T
Template Known Secondary structure		S	S								S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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