Return to main results Retrieve Phyre Job Id

Job DescriptionP39286
Confidence97.94%DateThu Jan 5 11:58:58 GMT 2012
Rank125Aligned Residues96
% Identity16%Templatec3izq1_
PDB info PDB header:ribosomal protein,hydrolaseChain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome
Resolution9.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120... ......130...... ...140.........150.... .....160..... ....170
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Query Sequence  RTSVLTRPDFYDGVKPIAANI. . . DQIVIVSAILPEL. . . . . . SLNIIDRYLVACETLQIE. PIIVLNKIDLL. . DDEGM
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Template Sequence  NFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRF
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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   171........180.. .......190........
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Query Sequence  AFVNEQMDIYRN. . . . . . IGYRVLMVSSHTQDGL
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Template Sequence  EEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGV
Template Known Secondary structure  T

GGG


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   326...330.........340.........350.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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