Job Description P39286 Confidence 95.60% Date Thu Jan 5 11:58:58 GMT 2012 Rank 396 Aligned Residues 84 % Identity 15% Template c3cphA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ras-related protein sec4; PDBTitle: crystal structure of sec4 in complex with rab-gdi Resolution 2.90 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	.	.	.	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T	Q	D
Query Conservation																			.	.	.
Alig confidence																			.	.	.																																											.	.
Template Conservation																																																																.	.
Template Sequence		Y	R	G	A	M	G	I	I	L	V	Y	D	V	T	D	E	R	T	F	T	N	I	K	Q	W	F	K	T	V	N	E	H	A	N	D	E	A	Q	L	L	L	V	G	N	K	S	D	M	E	T	R	V	V	T	A	D	Q	G	E	A	L	A	.	.	K	E	L	G	I	P	F	I	E	S	S	A	K	N	D	D
Template Known Secondary structure			T	T		S								T	T							T												T	T	T		S									T	T		S	S			S										.	.				T							B	T	T	T	T	B
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	P	L	E	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	N	E	I	F	F	T	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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