Job Description P39286 Confidence 99.91% Date Thu Jan 5 11:58:58 GMT 2012 Rank 10 Aligned Residues 136 % Identity 21% Template c3cnlA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of gnp-bound ylqf from t. maritima Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H
Query Conservation
Alig confidence																															.	.	.	.	.																											.	.	.																	.
Template Conservation																															.	.	.	.	.																											.	.	.																	.
Template Sequence		R	Q	I	K	D	L	L	R	L	V	N	T	V	V	E	V	R	D	A	R	A	P	F	A	T	S	A	Y	G	.	.	.	.	.	V	D	F	S	R	K	E	T	I	I	L	L	N	K	V	D	I	A	D	E	K	T	T	K	K	W	.	.	.	V	E	F	F	K	K	Q	G	K	R	V	I	T	T	H	K	.
Template Known Secondary structure									T	T		S								T	T	S	T	T	T	T	S		T	T	.	.	.	.	.	S			T	T	S									G	G	G	S									.	.	.							T	T								T	.
Template Predicted Secondary structure																															.	.	.	.	.																											.	.	.																	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		T	Q	D	G	L	K	P	L	E	E	A	L	.	.	.	T	G	R	I	S	I	F	A	G	Q	S	G	V	G	K	S	S	L	L	N	A	L	L	G	L	Q	K	E	I	L	T	N	D	I	S	D	N	S	G	L	G	Q	H	T	T	T	A	A	R	L	Y	H	F	P	H	G	G	D	V	I	D	S	P	G	V
Query Conservation														.	.	.
Alig confidence		.												.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	G	E	P	R	K	V	L	L	K	K	L	S	F	D	R	L	A	R	V	L	I	V	G	V	P	N	T	G	K	S	T	I	I	N	K	L	K	G	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	G	I	Q	W	F	S	L	E	N	G	V	K	I	L	D	T	P	G	I
Template Known Secondary structure		.	T	S													T	T								S	T	T	S	S										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S						T	T	S					S	S
Template Predicted Secondary structure		.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.																			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		271	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	F	G	L	W	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	K	N	I	F	S
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions