Job Description P39286 Confidence 98.42% Date Thu Jan 5 11:58:58 GMT 2012 Rank 86 Aligned Residues 85 % Identity 19% Template c3agqA_ PDB info PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii Resolution 3.22 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																					.												.																		.	.	.	.	.	.
Query SS confidence																																					.												.																		.	.	.	.	.	.
Query Sequence		A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	.	P	I	I	V	L	N	K	I	D	L	L	.	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	.	.	.	.	.	.	I	G	Y	R	V	L	M	V	S
Query Conservation																																					.												.																		.	.	.	.	.	.
Alig confidence																					.																.												.																		.	.	.	.	.	.
Template Conservation																					.
Template Sequence		A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	.	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	D	T	P	I	V	R	G	S
Template Known Secondary structure		S				S								T	T	T		S		G	.	G	G										T	T		S										T	T		S		T	T	T												T	G	G	G	T	S		T	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		192	.	.	.									.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		S	H	T	Q	.	.	.	.	.	.	.	.	D	G	L	K	P	L	E	E	A	L
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	A	L	E	G	D	A	E	W	E	A	K	I	L	E	L	A	G	F	L
Template Known Secondary structure		T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions