Job Description P39286 Confidence 97.19% Date Thu Jan 5 11:58:58 GMT 2012 Rank 191 Aligned Residues 77 % Identity 10% Template c2yc2D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small rab-related gtpase; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	.	.	.	.	.	.	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T	Q
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.
Template Sequence		G	V	Y	Y	A	I	L	V	F	D	V	S	S	M	E	S	F	E	S	C	K	A	W	F	E	L	L	K	S	A	R	P	D	R	E	R	P	L	R	A	V	L	V	A	N	K	T	Q	V	R	L	D	M	A	Q	D	W	A	.	.	.	.	.	.	.	T	T	N	T	L	D	F	F	D	V	S	A	A	D	A
Template Known Secondary structure												T	T																				S		T	T	S																							.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
				196	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	D	G	L	K	P	L	E	E	A	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	F	L	S	I	A	T	T	F	Y	R	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions