Job Description P39286 Confidence 98.48% Date Thu Jan 5 11:58:58 GMT 2012 Rank 82 Aligned Residues 181 % Identity 15% Template c2wkqA_ PDB info PDB header:transferase, cell adhesion Chain: A: PDB Molecule:nph1-1, ras-related c3 botulinum toxin substrate PDBTitle: structure of a photoactivatable rac1 containing the lov22 c450a mutant Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		M	S	K	N	K	L	S	K	G	Q	Q	R	R	V	N	A	N	H	Q	R	R	L	K	T	S	K	E	K	P	D	Y	D	D	N	L	F	G	E	P	D	E	G	.	.	.	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	G	D	V	H	R	C	N	I	R	R	T	I	R	S	L	V	T	G	D
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.											.																.	.	.	.	.	.	.	.	.
Template Conservation																																																									.																.	.	.	.	.	.	.	.	.
Template Sequence		T	E	H	V	R	D	A	A	E	R	E	G	V	M	L	I	K	K	T	A	E	N	I	D	E	A	A	K	E	L	I	K	C	V	V	V	G	D	G	A	V	G	K	T	C	L	L	I	S	Y	T	T	N	A	F	.	P	G	E	Y	I	P	T	V	F	D	N	Y	S	A	N	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S																										T	T									S	T	T	S	S											S			.			S					S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.																.	.	.	.	.	.	.	.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T	R	P	D	F	Y	D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	.	.	.	E	T	L	Q	I	E
Query Conservation																																																																									.	.	.
Alig confidence		.																														.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation		.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	M	V	D	G	K	P	V	N	L	G	L	W	D	T	A	G	L	E	D	Y	D	R	L	R	P	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	T	D	V	F	L	I	C	F	S	L	V	S	P	A	S	F	H	H	V	R	A	K	W	Y	P	E	V	R	H	H	C	P	N	T	P
Template Known Secondary structure		.				T	T														G	G	G	T	T	T	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S								T	T											T										T	T	S
Template Predicted Secondary structure		.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.														.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T	Q	D	G	L	K	P	L	E	E	A	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	L	V	G	T	K	L	D	L	R	D	D	K	D	T	I	E	K	L	K	E	K	K	L	T	P	I	T	Y	P	Q	G	L	A	M	A	K	E	I	G	A	V	K	Y	L	E	C	S	A	L	T	Q	R	G	L	K	T	V	F	D	E	A
Template Known Secondary structure													T											T	T																T	T		S							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions