Job Description P39286 Confidence 97.72% Date Thu Jan 5 11:58:58 GMT 2012 Rank 146 Aligned Residues 84 % Identity 17% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		122	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.	.	.	.		.	.
Predicted Secondary structure													.																																										.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence													.																																										.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		N	I	D	Q	I	V	I	V	S	A	I	.	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	.	.	.	.	.	.	.	.	.	.	.	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	.	V	L
Query Conservation													.																																										.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence													.																																										.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		D	S	D	A	V	L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E	I	Y	L
Template Known Secondary structure		T		S								T	T		T	T	T															T	T	S									G	G	G	G	G											T	T																T	T		S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		189	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	V	S	S	H	T	Q	D	.	G	L	K	P	L	E	E	A	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		E	G	S	A	F	T	S	E	K	S	I	H	S	I	F	R	T	A
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions