Job Description P39286 Confidence 99.66% Date Thu Jan 5 11:58:58 GMT 2012 Rank 15 Aligned Residues 171 % Identity 18% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		M	S	K	N	K	L	S	K	G	Q	Q	R	R	V	N	A	N	H	Q	R	R	L	K	T	S	K	E	K	P	D	Y	D	D	N	L	F	G	E	P	D	E	G	.	.	.	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	G	D	V	H	R	C	N	I	R	R	T	I	R	S	L	V	T	G	D
Query Conservation																																												.	.	.
Alig confidence																								.	.	.	.	.	.															.	.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		T	S	T	I	K	F	Y	K	R	R	I	N	K	L	M	K	E	L	E	S	I	K	.	.	.	.	.	.	I	I	P	S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	T	G	.	.	.	.	.	.	.	.	.	.	.	L	M	S	P	K	R	Y	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																								.	.	.	.	.	.										B	T	T	S	S										T	.	.	.	.	.	.	.	.	.	.	.				S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.	.	170	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T	R	P	D	F	Y	D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	.	.	.	.	.	R	Y	L	V	A	C	E	T	L	Q
Query Conservation																																																																			.	.	.	.	.
Alig confidence		.	.	.																							.	.	.																	.	.																				.	.	.	.	.
Template Conservation		.	.	.																							.	.	.																	.	.
Template Sequence		.	.	.	I	P	I	N	N	R	K	I	M	L	V	D	T	V	G	F	I	R	G	I	P	P	.	.	.	Q	I	V	D	A	F	F	V	T	L	S	E	A	K	Y	S	.	.	D	A	L	I	L	V	I	D	S	T	F	S	E	N	L	L	I	E	T	L	Q	S	S	F	E	I	L	R	E	I	G	V	S	G
Template Known Secondary structure		.	.	.				T	T											B		S	S			G	.	.	.	G	G										G	G	G	G	S	.	.	S								T	T	S																				T			S
Template Predicted Secondary structure		.	.	.																							.	.	.																	.	.
Template SS confidence
					221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		I	E	P	I	I	V	L	N	K	I	D	L	L	D	.	.	.	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T	Q	D	G	L	K	P	L	E	E	A	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		K	P	I	L	V	T	L	N	K	I	D	K	I	N	G	D	L	Y	K	K	L	D	L	V	E	K	L	S	K	E	L	Y	S	P	I	F	D	V	I	P	I	S	A	L	K	R	T	N	L	E	L	L	R	D	K	I
Template Known Secondary structure											G	G	G			S																		S									B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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