 |
Job Description | P39286 | Confidence | 97.94% | Date | Thu Jan 5 11:58:58 GMT 2012 |
Rank | 126 | Aligned Residues | 50 |
% Identity | 22% | Template | c2h5eB_ |
PDB info |
PDB header:translation | Chain: B: PDB Molecule:peptide chain release factor rf-3; |
PDBTitle: crystal structure of e.coli polypeptide release factor rf3
|
Resolution | 2.80 Å |
|
 |
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | S | I | F | A | G | Q | S | G | V | G | K | S | S | L | L | N | A | L | L | G | L | Q | K | E | I | L | T | N | D | I | S | D | N | S | G | L | G | Q | H | T | T | T | A | A | R | L | Y | H | F | P | H | G | G | D | V | I | D | S | P | G | V | R | E | F |
Query Conservation |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|   |
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
R | T | F | A | I | I | S | H | P | D | A | G | K | T | T | I | T | E | K | V | L | L | F | G | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | T | S | V | M | Q | F | P | Y | H | D | C | L | V | N | L | L | D | T | P | G | H | E | D | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
|
| S | T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|