Job Description P39286 Confidence 100.00% Date Thu Jan 5 11:58:58 GMT 2012 Rank 3 Aligned Residues 268 % Identity 41% Template c1u0lB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable gtpase engc; PDBTitle: crystal structure of yjeq from thermotoga maritima Resolution 2.80 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																			.															.	.	.	.
Query SS confidence																			.															.	.	.	.
Query Sequence		G	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	.	G	D	V	H	R	C	N	I	R	R	T	I	R	S	.	.	.	.	L	V	T	G	D	R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T	R	P	D	F	Y	D	G	V
Query Conservation																			.															.	.	.	.
Alig confidence																			.															.	.	.	.																.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		G	I	V	V	S	F	H	S	N	M	V	T	V	E	D	E	E	T	G	E	R	I	L	C	K	L	R	G	K	F	R	L	Q	N	L	K	I	Y	V	G	D	R	V	E	Y	T	P	D	E	T	G	.	.	.	.	.	.	S	G	V	I	E	N	V	L	H	R	K	N	L	L	T	K	P	H	.	.	.	.	.
Template Known Secondary structure									T	T							S	S	S										S	S	T	T	T	T	T					T	T									S	T	T	.	.	.	.	.	.	S	B									S				T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.							.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	.	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S	H	T	Q
Query Conservation																		.
Alig confidence		.	.	.														.																																																			.
Template Conservation		.	.	.																																																																	.
Template Sequence		.	.	.	V	A	N	V	D	Q	V	I	L	V	V	T	V	K	M	P	E	T	S	T	Y	I	I	D	K	F	L	V	L	A	E	K	N	E	L	E	T	V	M	V	I	N	K	M	D	L	Y	D	E	D	D	L	R	K	V	R	E	L	E	E	I	Y	S	G	.	L	Y	P	I	V	K	T	S	A	K	T	G
Template Known Secondary structure		.	.	.			S										S	S	S	S																	T	T										G	G	G																	T	T	.	T	S							T	T	T
Template Predicted Secondary structure		.	.	.																																																																	.
Template SS confidence
					376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	L	K	P	L	E	E	A	L	T	G	R	I	S	I	F	A	G	Q	S	G	V	G	K	S	S	L	L	N	A	L	L	G	L	Q	K	E	I	L	T	N	D	I	S	D	N	S	G	L	G	Q	H	T	T	T	A	A	R	L	Y	H	F	P	H	G	G	D	V	I	D	S	P	G	V	R	E	F	G	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	I	E	E	L	K	E	Y	L	K	G	K	I	S	T	M	A	G	L	S	G	V	G	K	S	S	L	L	N	A	I	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	K	L	R	T	T	T	T	A	Q	L	L	K	F	D	F	G	G	Y	V	V	D	T	P	G	F	A	N	L	E	I
Template Known Secondary structure		T	T									T	T	S							S	T	T	S	S							T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S		B					T	T	S					S	S		S	S	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.															.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	L	E	P	E	Q	I	T	Q	G	F	V	E	F	H	D	Y	L	G	L	C	K	Y	R	D	C	K	H	D	T	D	P	G	C	A	I	R	E	A	V	E	E	G	K	I	A	E	T	R	F	E	N	Y	H	R	I	L	E	S	M	A	Q	V	K
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		N	D	I	E	P	E	E	L	K	H	Y	F	K	E	F	G	D	.	.	K	Q	C	F	F	S	D	C	N	H	V	D	E	P	E	C	G	V	K	E	A	V	E	N	G	E	I	A	E	S	R	Y	E	N	Y	V	K	M	F	Y	E	L	L	G	R	R
Template Known Secondary structure			S	S						G	G	G		T	T	S	S	S	.	.				S	S	T	T			S	S	S		S	S										T	S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.			.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions