Job Description P39286 Confidence 100.00% Date Thu Jan 5 11:58:58 GMT 2012 Rank 5 Aligned Residues 267 % Identity 36% Template c1t9hA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase. Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																					.	.	.											.	.	.	.
Query SS confidence																					.	.	.											.	.	.	.
Query Sequence		G	I	V	I	S	R	F	G	M	H	A	D	V	E	S	A	D	G	D	.	.	.	V	H	R	C	N	I	R	R	T	I	.	.	.	.	R	S	L	V	T	G	D	R	V	V	W	R	P	G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T	R	P	D	F	Y	D
Query Conservation																					.	.	.											.	.	.	.
Alig confidence																					.	.	.											.	.	.	.																		.	.	.	.	.	.																			.	.	.
Template Conservation																																																							.	.	.	.	.	.																			.	.	.
Template Sequence		G	K	I	I	K	A	L	S	G	F	Y	Y	V	L	D	E	S	E	D	S	D	K	V	I	Q	C	R	G	R	G	I	F	R	K	N	K	I	T	P	L	V	G	D	Y	V	V	Y	Q	A	E	N	D	K	.	.	.	.	.	.	E	G	Y	L	M	E	I	K	E	R	T	N	E	L	I	R	P	P	.	.	.
Template Known Secondary structure									T	T								S	S	S	S								S		S	S			S							B	T									T	T	S	.	.	.	.	.	.											S				T	T	T	T	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.																			.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																				.																																						.
Query SS confidence																				.																																						.
Query Sequence		G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	.	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D	L	L	D	D	E	G	.	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	V	L	M	V	S	S
Query Conservation																				.																																						.
Alig confidence		.	.	.	.	.														.																																						.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	I	C	N	V	D	Q	A	V	L	V	F	S	A	V	Q	P	S	F	S	T	A	L	L	D	R	F	L	V	L	V	E	A	N	D	I	Q	P	I	I	C	I	T	K	M	D	L	I	E	D	Q	D	T	E	D	T	I	Q	A	Y	A	E	D	Y	R	N	I	G	Y	D	V	Y	L	T	S	S
Template Known Secondary structure		.	.	.	.	.													S	T	T	T	T															T	T	T										G	G	G																					T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	Q	D	G	L	K	P	L	E	E	A	L	T	G	R	I	S	I	F	A	G	Q	S	G	V	G	K	S	S	L	L	N	A	L	L	G	L	Q	K	E	I	L	T	N	D	I	S	D	N	S	G	L	G	Q	H	T	T	T	A	A	R	L	Y	H	F	P	H	G	G	D	V	I	D	S	P	G	V	R	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		K	D	Q	D	S	L	A	D	I	I	P	H	F	Q	D	K	T	T	V	F	A	G	Q	S	G	V	G	K	S	S	L	L	N	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	T	R	H	V	E	L	I	H	T	S	.	G	G	L	V	A	D	T	P	G	F	S	S
Template Known Secondary structure					T	T		T	T	T	G	G	G	G	T	T	S							S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	.	T					S	S		S		S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																					.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	L	W	H	L	E	P	E	Q	I	T	Q	G	F	V	E	F	H	D	Y	L	G	L	C	K	Y	R	D	C	K	H	D	T	D	P	G	C	A	I	R	E	A	V	E	E	G	K	I	A	E	T	R	F	E	N	Y	H	R	I	L	E	S	M	A	Q	V	K	T	R	K	N
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		L	E	F	T	D	I	E	E	E	E	L	G	Y	T	F	P	D	I	R	E	K	S	S	S	C	K	F	R	G	C	L	H	L	K	E	P	K	C	A	V	K	Q	A	V	E	D	G	E	L	K	Q	Y	R	Y	D	H	Y	V	E	F	M	T	E	I	K	D	R	K	.	P	R	Y
Template Known Secondary structure					T	T							G	G	G	S							G	G	G		S	S	T	T			S	S	S		S	S										T	S	S																	T	T	S	.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions