Job Description P39286 Confidence 97.75% Date Thu Jan 5 11:58:58 GMT 2012 Rank 143 Aligned Residues 78 % Identity 21% Template c1r5nA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp Resolution 2.90 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																			.													.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence															.	.	.	.	.	.																			.													.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		D	Q	I	V	I	V	S	A	I	L	P	E	L	.	.	.	.	.	.	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	.	P	I	I	V	L	N	K	I	D	L	L	D	.	.	.	.	.	.	.	.	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	.	.	.	.	R	N	I	G
Query Conservation															.	.	.	.	.	.																			.													.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence															.	.	.	.	.	.																			.													.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		D	I	G	V	L	V	I	S	A	R	R	G	E	F	E	A	G	F	E	R	G	G	Q	T	R	E	H	A	V	L	A	R	T	Q	G	I	N	H	L	V	V	V	I	N	K	M	D	E	P	S	V	Q	W	S	E	E	R	Y	K	E	C	V	D	K	L	S	M	F	L	R	R	V	A	G	Y	N	S	K	T	D
Template Known Secondary structure		S									S	T	T					T	T	S	S	S													T	T		S	S								S	S	S	T	T		S	S																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	V	L	M	V	S	S	H	T	Q	D	G	L	K	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	Y	M	P	V	S	A	Y	T	G	Q	N	V	K	D	R
Template Known Secondary structure								B	T	T	T	T	B	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions