Job Description P39286 Confidence 98.89% Date Thu Jan 5 11:58:58 GMT 2012 Rank 43 Aligned Residues 108 % Identity 23% Template c1g7tA_ PDB info PDB header:translation Chain: A: PDB Molecule:translation initiation factor if2/eif5b; PDBTitle: x-ray structure of translation initiation factor if2/eif5b2 complexed with gdpnp Resolution 2.00 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	P	A	A	E	G	V	N	V	K	G	I	V	E	A	V	H	E	R	T	S	V	L	T	R	P	D	F	Y	D	G	V	K	P	I	A	A	N	I	D	Q	I	V	I	V	S	A	I	L	P	E	L	S	L	N	I	I	D	R	Y	L	V	A	C	E	T	L	Q	I	E	P	I	I	V	L	N	K	I	D
Query Conservation
Alig confidence														.	.	.	.	.												.	.	.	.	.	.	.	.																								.
Template Conservation														.	.	.	.	.												.	.	.	.	.	.	.	.																								.
Template Sequence		T	L	P	G	L	F	F	I	D	T	P	G	.	.	.	.	.	H	E	A	F	T	T	L	R	K	R	G	.	.	.	.	.	.	.	.	G	A	L	A	D	L	A	I	L	I	V	D	I	N	E	G	F	K	P	Q	T	Q	E	.	A	L	N	I	L	R	M	Y	R	T	P	F	V	V	A	A	N	K	I	D
Template Known Secondary structure		T											T	.	.	.	.	.	T	T		G	G	G	S			T	T	.	.	.	.	.	.	.	.			S		S								T	T	T									.								T	T										G	G
Template Predicted Secondary structure														.	.	.	.	.												.	.	.	.	.	.	.	.																								.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		164	.	.																							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	G	M	A	F	V	N	E	Q	M	D	I	Y	R	N	I	G	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	M	V	S	S	H	T	Q	D	G	L	K	P	L	E	E	A	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	H	G	W	R	V	H	E	G	R	P	F	M	E	T	F	S	K	Q	D	I	Q	V	Q	Q	K	L	D	T	K	V	Y	E	L	V	G	K	L	H	E	E	G	F	E	S	E	R	F	D	R	V	T	D	F	A	S	Q	V	S	I	I	P	I	S	A	I	T	G	E	G	I	P	E	L	L	T	M	L
Template Known Secondary structure		G	S	T	T					T	T								T	T	S																						T	T						T	T	T		S		T	T	T	S								S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions