|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | S | I | P | A | F | D | D | N | Y | I | W | V | L | N | D | E | A | G | R | C | L | I | V | D | P | G | . |
. |
. |
D | A | E | P | V | L | N | A | I | A | A | N | N | W | Q | . |
. |
. |
P | E | A | I | F | L | T | H | H | H | H | D | H | V | G | G | V | K | E | L | V | E | K | F | P | Q | I | V | V | Y | G |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
| . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . | . |
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|
| . |   |
|
|
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | C | L | L | G | D | V | Q | V | P | . |
V | F | L | L | R | L | G | E | A | S | W | A | L | V | E | G | G | I | S | R | D | A | E | L | V | W | A | D | L | C | R | W | V | A | D | P | S | Q | V | H | Y | W | L | I | T | H | K | H | Y | D | H | C | G | L | L | P | Y | L | C | P | R | L | P | N | V | Q | V | L | A |
Template Known Secondary structure |   |
 |  |  |  | S |
| T | T | S |
| . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |
|
|
|
| S |  |  |  |  | T | T |  |  |  |  | G | G | G |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
. |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
|
|
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
Query Sequence |   |
P | Q | E | T | Q | D | K | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | Q | V | V | K | D | G | E | T | A | F | V | L | G | H | E | . |
F | S | V | I | A | T | P | G | H | T | L | G | H | I | C | Y | F | S | K | . |
. |
P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   | . |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
S | E | R | T | C | Q | A | W | K | S | E | S | A | V | R | V | V | E | R | L | N | R | Q | L | L | R | A | E | Q | R | L | P | E | A | C | A | W | D | A | L | P | V | R | A | V | A | D | G | E | W | L | E | L | G | P | R | H | R | L | Q | V | I | E | A | H | G | H | S | D | D | H | V | V | F | Y | D | V | R | R | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|
|
|
|
|
|
|
| G | G | G | S |
|  |  |  |  |
| T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S | S | S | T | T |
|  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | F | C | G | D | T | L | F | S | G | G | C | G | R | . |
. |
. |
. |
. |
L | F | E | G | T | A | S | Q | M | Y | Q | S | L | K | K | L | S | A | L | P | D | D | T | L | V | C | C | A | H | E | Y | T | L | S | N | M | K | F | A | L | S | I | L | P | H | D | L | S | I | N | D | Y | Y | R | K | V | K | E | L | R |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|   |   |   |   |
|   | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |
|   |
|
|
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | L | F | C | G | D | A | L | G | E | F | D | E | A | E | G | V | W | R | P | L | V | F | D | D | M | E | A | Y | L | E | S | L | E | R | L | Q | R | L | P | T | L | L | Q | L | I | P | G | H | G | G | L | L | R | G | R | L | A | A | D | G | A | E | S | A | Y | T | E | C | L | R | L | C | R | R | L | L | W | R | Q |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T |
|  |  |
| T | T | T | S |
|  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S |  |  |  |  | S | S | S |
|  |  |  | T |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |
  |   |
197 | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
A | K | N | Q | I | T |
Query Conservation |   |
  |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
S | M | G | E | S | L |
Template Known Secondary structure |   |
T | T | T |
|
|  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . |
  |