|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
S | I | P | A | F | D | D | N | Y | I | W | V | L | N | . |
. |
D | E | A | G | R | C | L | I | V | D | P | G | D | A | E | P | V | L | N | A | I | A | A | N | N | W | . |
. |
. |
Q | P | E | A | I | F | L | T | H | H | H | H | D | H | V | G | G | V | K | E | L | V | E | K | F | . |
. |
. |
. |
. |
. |
P | Q | I | V |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|   |
|
|
|   | . | . |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   | . | . | . |   |
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
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|
| . | . |
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|
| . | . | . |
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|
| . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
| . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | A | K | A | R | N | V | T | . |
S | V | A | L | K | L | L | E | E | R | R | S | V | W | L | F | D | C | G | E | A | . |
. |
T | Q | H | Q | X | L | H | T | T | I | K | P | R | K | I | E | K | I | F | I | T | H | X | H | G | D | H | V | Y | G | L | P | G | L | L | G | S | R | S | F | Q | G | G | E | D | E | L | T |
Template Known Secondary structure |   |
|
| S | S |
|
| B |
| . |  |  |  |  |  |  | T | T | T | T | S |  |  |  |  |  |
|
|
| T | T | . | . |  |  |  |  |  | T | T | S | S |
|
| G | G | G |  |  |  |  |  |
| S | B |
|
| G | G | G | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
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  |   |
13 | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
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|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
V | Y | G | P | Q | E | T | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | K | G | T | T | Q | V | V | K | D | G | E | T | A | F | V | L | G | H | E | F | S | V | I | A | T | P | G | H | T | L | G | H | I | C | Y | F | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Y |
Query Conservation |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
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|
|
|
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|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | Y | G | P | K | G | I | K | A | F | I | E | T | S | L | A | V | T | K | T | H | L | T | Y | P | L | A | I | Q | E | I | E | E | G | I | V | F | E | D | D | Q | F | I | V | T | A | V | S | V | I | . |
H | G | V | E | A | F | G | Y | R | V | Q | E | K | D | V | P | G | S | L | L | E | P | P | K | K | G | R | S | V |
Template Known Secondary structure |   |
 |  |  | S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |
|  |  |  |  |  |
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| B | . | S | S | S | S | B |  |  |  |  |  |  |  |
|
| B |
|
|
|
|
|
|
|
| B |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
123 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
L | F | C | G | D | T |
Query Conservation |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
Template Sequence |   |
V | F | S | G | D | T |
Template Known Secondary structure |   |
 |  |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
  |   |
207 | . | . | 210 | . | . |
  |