Job Description P0AC84 Confidence 99.96% Date Thu Jan 5 11:17:34 GMT 2012 Rank 12 Aligned Residues 200 % Identity 19% Template c3lvzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr6230 protein; PDBTitle: new refinement of the crystal structure of bjp-1, a subclass b32 metallo-beta-lactamase of bradyrhizobium japonicum Resolution 1.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																															.	.	.															.	.	.
Query SS confidence																															.	.	.															.	.	.
Query Sequence		N	L	N	S	I	P	A	F	D	D	N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	.	.	.	D	A	E	P	V	L	N	A	I	A	A	N	N	W	.	.	.	Q	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K	E	L	V	E	K	F	P	Q	I	V	V	Y
Query Conservation																															.	.	.															.	.	.
Alig confidence													.										.								.	.	.															.	.	.																											.
Template Conservation													.										.																																																						.
Template Sequence		N	I	Y	Y	V	G	T	D	G	I	A	.	V	Y	V	I	K	T	S	Q	G	.	L	I	L	M	D	T	A	M	P	Q	S	T	G	M	I	K	D	N	I	A	K	L	G	F	K	V	A	D	I	K	L	I	L	N	T	H	A	H	L	D	H	T	G	G	F	A	E	I	K	K	E	T	G	.	A	Q	L	V
Template Known Secondary structure		T							S	S	S		.							T	T		.									G	G	G											T	T			G	G	G							S			S					T	T										.
Template Predicted Secondary structure													.										.																																																						.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.
		76	.	.	.	80	.																					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		G	P	Q	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	G	H	E	F	S	V	I	A	T	P	G	H	T	L	G	H	I	C	Y	F	S	K	.	.	P	Y	L	F	C	G	D	T	L	F	S	G	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation
Template Sequence		A	G	E	R	D	K	P	L	L	E	G	G	Y	Y	P	G	D	E	K	N	E	D	L	A	F	P	A	V	K	V	D	R	A	V	K	E	G	D	R	V	T	L	G	D	T	T	L	T	A	H	A	T	P	G	H	S	P	G	C	T	S	W	E	M	T	V	K	D	G	K	E	D	R	E	V	L	F	F	C	S
Template Known Secondary structure				G	G	G							T			T	T		T	T		G	G	G								S					T	T						T	T										S	S	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		134	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Query Sequence		C	G	R	L	.	.	.	.	.	.	.	.	.	F	E	G	T	A	S	Q	M	Y	Q	S	L	K	K	L	S	A	L	P	D	D	T	L	V	C	C	A	H	E	Y	T	L	S	N	M	K	F	A	L	S	I	L	P	H	D	.	.	.	.	.	.	.	L	S	I	N	D	Y	Y	R	K	V	K	E	L	R	A
Query Conservation						.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																						.																								.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		G	T	V	A	L	N	R	L	V	G	Q	P	T	Y	A	G	I	V	D	D	Y	R	A	T	F	A	K	A	K	A	M	K	I	D	.	V	L	L	G	P	H	P	E	V	Y	G	M	Q	A	K	R	A	E	M	K	D	G	A	P	N	P	F	I	K	P	G	E	L	V	T	Y	A	T	S	L	S	E	D	F	D
Template Known Secondary structure					T	T				S	S	S		S	S	T	T															S			S	.					S	S	G	G	G	T	T										T	T	S			T	T			T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	Q	I	T	L	P	V	I	L	K	N	E	R	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	K	Q	L	A	K	Q	T	A
Template Known Secondary structure		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									282	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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