Job Description P0AC84 Confidence 99.28% Date Thu Jan 5 11:17:34 GMT 2012 Rank 64 Aligned Residues 159 % Identity 18% Template c3g1pA_ PDB info PDB header:lyase Chain: A: PDB Molecule:protein phnp; PDBTitle: crystals structure of phnp from e.coli k-12 Resolution 1.40 Å

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		1	.	.	.	.	.	.	.	.	10	.																										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	L	N	S	I	P	A	F	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	D	A	E	P	V	L	N	A	I	A	A	N	N	W	Q	P	E	A	I	F	L	T	H	H	H
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.													.	.	.
Template Conservation																																														.													.	.	.
Template Sequence		L	T	L	T	L	T	G	T	G	G	A	Q	G	V	P	A	W	G	C	E	C	A	A	C	A	R	A	R	R	S	P	Q	Y	R	R	Q	P	C	S	G	V	V	K	F	.	N	D	A	I	T	L	I	D	A	G	L	H	.	.	.	D	L	A	D	R	W	S	P	G	S	F	Q	Q	F	L	L	T	H	Y	H
Template Known Secondary structure										B		S	S		B	S		T	T			S										G	G	G		B		B	S							.	T	T										T	.	.	.	T							T	T	S	S						S
Template Predicted Secondary structure																																														.													.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																			.															.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																			.															.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		H	D	H	V	G	G	V	K	E	L	V	E	K	F	P	Q	I	.	V	V	Y	G	P	Q	E	T	Q	D	K	G	T	T	.	.	.	.	.	.	.	.	.	.	Q	V	V	K	D	G	E	T	A	F	V	L	G	H	E	F	S	V	I	A	T	P	G	H	T	L	G	H	I	C	Y	F	S	K	P	.	.	.
Query Conservation																			.															.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence																			.															.	.	.	.	.	.	.	.	.	.																							.													.	.	.
Template Conservation																																																																		.
Template Sequence		M	D	H	V	Q	G	L	F	P	L	R	W	G	V	G	D	P	I	P	V	Y	G	P	P	D	E	Q	G	C	D	D	L	F	K	H	P	G	L	L	D	F	S	H	T	V	E	P	F	V	V	F	D	L	Q	G	L	Q	V	T	P	L	P	L	N	.	H	S	K	L	T	F	G	Y	L	L	E	T	A	H	S
Template Known Secondary structure						G	G	G	T	T	T	T	T		S	S	S										S	S		S	T	T	T	T	T	S		T	T									T	T						T	T										.	S	S	S										S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
			122	.	.	.	.	.	.	.	130	.	.	.	.	.																						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Y	L	F	C	G	D	T	L	F	S	G	G	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	F	E	G	T	A	S	Q	M	Y	Q	S	L	K	K	L	S	A	L	P	D	D	T	L	V	C	C	A	H
Query Conservation		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																													.
Template Sequence		R	V	A	W	L	S	D	T	A	G	L	P	E	K	T	L	K	F	L	R	N	N	Q	P	Q	V	M	V	M	D	C	S	H	P	P	R	A	D	A	P	R	N	H	C	D	L	N	T	V	L	A	L	N	Q	V	I	R	S	P	.	R	V	I	L	T	H
Template Known Secondary structure								S		S	S												T			S								B	S	S		S	S			S	S	S		B														S	.						S
Template Predicted Secondary structure																																																													.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions