Job Description P0AC84 Confidence 99.62% Date Thu Jan 5 11:17:34 GMT 2012 Rank 51 Aligned Residues 145 % Identity 17% Template c3bk2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:metal dependent hydrolase; PDBTitle: crystal structure analysis of the rnase j/ump complex Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.													.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	L	N	S	I	P	A	F	D	D	.	.	.	N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	E	P	V	L	N	A	I	A	A	N	N	W	Q	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K	E	L
Query Conservation													.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.		.							.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.							.
Template Sequence		V	E	I	I	P	L	G	G	X	G	E	I	G	K	N	.	I	T	V	F	R	F	.	R	D	E	I	F	V	L	D	G	G	L	A	F	P	E	E	G	X	P	G	V	D	L	L	I	P	R	V	D	Y	L	I	E	H	R	H	K	I	K	A	W	V	L	T	H	G	H	E	D	H	I	G	G	L	P	F	L
Template Known Secondary structure									S	B	S	B	S	S			.							.	T	T										B				T	T	S	T	T														T	G	G	G															T	T
Template Predicted Secondary structure																	.							.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		66	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.															.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.
Predicted Secondary structure				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																						.	.	.	.
Query SS confidence				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																						.	.	.	.
Query Sequence		V	E	.	.	.	.	K	F	P	Q	I	V	V	Y	G	P	Q	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	G	.	H	E	F	S	V	I	A	T	P	G	H	T	L	G	H	I	C	Y	F	S	K	.	.	.	.	P	Y
Query Conservation				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																						.	.	.	.
Alig confidence				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																						.	.	.	.
Template Conservation
Template Sequence		L	P	X	I	F	G	K	E	S	P	V	P	I	Y	G	A	R	L	T	L	G	L	L	R	G	K	L	E	E	F	G	L	R	P	G	A	F	N	L	K	E	I	S	P	D	D	R	I	Q	V	G	R	Y	F	T	L	D	L	F	R	X	T	H	S	I	P	D	N	S	G	V	V	I	R	T	P	I	G	T	I
Template Known Secondary structure								S				S																			T	T			S	T	T	S							T	T						T	T	T											S	S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	C	G	D	T	L	F	S	G	G	C	G	R	L	F	E	G	T	A	S	Q	M	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	T	G	D	F	K	L	D	P	T	P	I	D	G	K	V	S	H	L	A	K	V	A	Q
Template Known Secondary structure						S					S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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