Job Description P0AC84 Confidence 99.41% Date Thu Jan 5 11:17:34 GMT 2012 Rank 57 Aligned Residues 124 % Identity 19% Template c3af5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ph1404; PDBTitle: the crystal structure of an archaeal cpsf subunit, ph1404 from2 pyrococcus horikoshii Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30															.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	L	N	S	I	P	A	F	D	D	.	.	.	N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	P	V	L	N	A	I	A	A	N	N	W	Q	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K
Query Conservation													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.		.							.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.							.
Template Sequence		I	R	I	T	G	L	G	G	F	R	E	V	G	R	S	.	A	L	L	V	Q	T	.	D	E	S	F	V	L	V	D	F	G	V	N	V	A	M	L	N	D	P	Y	K	A	F	P	H	F	D	A	P	E	F	Q	Y	V	L	R	E	G	L	L	D	A	I	I	I	T	H	A	H	L	D	H	C	G	M	L	P
Template Known Secondary structure										S	S	S	S	S			.							.	S	S											G	G	G	T	T						S			T	T										T	T								S		S	S					T	T
Template Predicted Secondary structure																	.							.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		64	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80																															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		E	L	V	E	K	F	.	P	Q	I	V	V	Y	G	P	Q	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	.	G	H	E	F	S	V	I	A	T	P	G	H	T
Query Conservation								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.										.
Template Conservation																																																																														.
Template Sequence		Y	L	F	R	Y	N	L	F	D	G	P	I	Y	T	T	P	P	T	R	D	L	M	V	L	L	Q	K	D	F	I	E	I	Q	Q	S	N	G	Q	D	P	L	Y	R	P	R	D	I	K	E	V	I	K	H	T	I	T	L	D	Y	G	E	V	R	D	I	S	P	D	I	R	L	T	L	H	N	A	.	G	H	I
Template Known Secondary structure						T	T				S																										T	T				S	S											T						T	T							T	T									.	S	S	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.
		112	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		L	G	H	I	C	Y	F	S	.	.	.	.	.	.	K	P	Y	L	F	C	G	D
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	S	A	I	V	H	L	H	I	G	N	G	L	H	N	I	A	I	T	G	D
Template Known Secondary structure		T	T									T	T	T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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