Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC84
Confidence100.00%DateThu Jan 5 11:17:34 GMT 2012
Rank8Aligned Residues181
% Identity37%Templatec2xf4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydroxyacylglutathione hydrolase; PDBTitle: crystal structure of salmonella enterica serovar2 typhimurium ycbl
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10.........20 .........30 .........40.........50.........60.........70......
Predicted Secondary structure 
..




.





.















Query SS confidence 







. .











.









.













































Query Sequence  MNLNSIPA. . FDDNYIWVLNDE. AGRCLIVDPG. DAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYG
Query Conservation 
 
     ..  


 


   .     




.    
   
   
  
  

 

 
 

 

   
        
  
Alig confidence 







..



.






.









.













































Template Conservation 
       
    
. 


        



 
         
      
  




 
 

  
               
Template Sequence  MNYRIIPVTAFSQN. CSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIGP
Template Known Secondary structure 
TTTT.
TTT



S
T

S
S
TTT



Template Predicted Secondary structure 






.






























Template SS confidence 















































































   1........10.... .....20.........30.........40.........50.........60.........70.........
 
   77..80. ........90.........100.........110.........120 .........130.....
Predicted Secondary structure 

...................






















..








Query SS confidence 




. . . . . . . . . . . . . . . . . . .






































. .














Query Sequence  PQETQ. . . . . . . . . . . . . . . . . . . DKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK. . PYLFCGDTLFSGGCG
Query Conservation       ...................          
  
  
     

 




 
 
     ..  




 

    
Alig confidence 




...................






































..














Template Conservation                                                     


             




 
      
Template Sequence  EKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDEQSQLLISGDVIFKGGVG
Template Known Secondary structure 
GGGTTT








SB


TT
TT

SSSTT
TTTTTSTT
Template Predicted Secondary structure 













































Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   136 ...140......... 150.........160.........170.........180.........190.........200.........210..
Predicted Secondary structure 
..




.

























Query SS confidence 
. .












.






























































Query Sequence  R. . LFEGTASQMYQSL. KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQ
Query Conservation   ..   
       

. 

  
   
 
 


 
   

 

  
                         



  
  
Alig confidence 
..












.

















....................................








Template Conservation                
    
  
     
 



 ....................................  
   
  
Template Sequence  RSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSTLGYERL
Template Known Secondary structure 


STT

TGGG
TT
SSS
....................................
Template Predicted Secondary structure 
















....................................


Template SS confidence 















































































   160.........170.........180.........190.... .....200...
 
   213.....
Predicted Secondary structure 


Query SS confidence 





Query Sequence  INVFLR
Query Conservation   




Alig confidence 





Template Conservation   
  
 
Template Sequence  HNPFLQ
Template Known Secondary structure 
TT
.
Template Predicted Secondary structure 




Template SS confidence 





   204.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions