Job Description P0AC84 Confidence 99.88% Date Thu Jan 5 11:17:34 GMT 2012 Rank 41 Aligned Residues 149 % Identity 15% Template c2r2dC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:zn-dependent hydrolases; PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens Resolution 1.75 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																										.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	D	A	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	N	A	I	A	A	N	N	W	Q	.	.	.	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																			.
Template Conservation												.																																																																					.
Template Sequence		S	A	Y	L	I	Q	C	T	D	A	.	T	V	L	Y	D	T	G	C	H	P	E	C	M	G	T	N	G	R	W	P	A	Q	S	Q	L	N	A	P	Y	I	G	A	S	E	C	N	L	P	E	R	L	R	Q	L	G	L	S	P	D	D	I	S	T	V	V	L	S	H	L	H	N	D	H	A	G	C	V	E	.
Template Known Secondary structure									T	T		.								S		T	T		S	S	T	T		S	S								S		B				T	T		S								T	T			G	G	G		S					S			S	T	T	T	S	T	T	G	G	.
Template Predicted Secondary structure												.																																																																					.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																												.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	E	K	F	P	Q	I	V	V	Y	G	P	Q	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	G	H	E	F	S	V	I	A	T	P	G	H	T	L	G	H	I	C	Y
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	F	G	K	S	R	L	I	A	H	E	D	E	F	A	T	A	V	R	Y	F	A	T	G	D	H	S	S	P	Y	I	V	K	D	I	E	A	W	L	A	T	P	R	N	W	D	L	V	G	R	D	E	R	E	R	E	L	A	P	G	V	N	L	L	N	F	G	T	G	H	A	S	G	M	L	G	L
Template Known Secondary structure		.	.	.	G		S	S	S																			T			S	S	S	S									T	T	S									T	T								T	T								S	S	S	S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		118	.						120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.													.	.	.	.	.	.																												.	.
Query SS confidence				.	.	.	.	.													.	.	.	.	.	.																												.	.
Query Sequence		F	S	.	.	.	.	.	K	P	Y	L	F	C	G	D	T	L	F	S	.	.	.	.	.	.	G	G	C	G	R	L	F	E	G	T	A	S	Q	M	Y	Q	S	L	K	K	L	S	A	L	P	D	D	.	.	T	L	V	C	C	A	H	E
Query Conservation				.	.	.	.	.													.	.	.	.	.	.																												.	.
Alig confidence				.	.	.	.	.													.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		A	V	R	L	E	K	Q	P	G	F	L	L	V	S	D	A	C	Y	T	A	T	N	Y	G	P	P	A	R	R	A	G	V	L	H	D	T	I	G	Y	D	R	T	V	S	H	I	R	Q	Y	A	E	S	R	S	L	T	V	L	F	G	H	D
Template Known Secondary structure						S	S	S								T	T	S							S	S	S					S	S		S																				T						S	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions