Job Description P0AC84 Confidence 99.95% Date Thu Jan 5 11:17:34 GMT 2012 Rank 17 Aligned Residues 156 % Identity 19% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.	.													.	.																												.													.	.	.	.
Query SS confidence																					.	.	.													.	.																												.													.	.	.	.
Query Sequence		N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	.	.	.	D	A	E	P	V	L	N	A	I	A	A	N	.	.	N	W	Q	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K	E	L	V	E	K	F	.	P	Q	I	V	V	Y	G	P	Q	E	T	Q	.	.	.	.
Query Conservation																					.	.	.													.	.																												.													.	.	.	.
Alig confidence			.										.								.	.	.													.	.																												.													.	.	.	.
Template Conservation			.										.
Template Sequence		N	.	A	Y	L	V	K	L	N	G	A	.	N	V	L	I	D	G	W	K	G	N	Y	A	K	E	F	I	D	A	L	S	K	I	V	D	P	K	E	I	T	H	I	I	V	N	H	T	E	P	D	H	S	G	S	L	P	A	T	L	K	T	I	G	H	D	V	E	I	I	A	S	N	F	G	K	R	L	L	E
Template Known Secondary structure			.							T	T		.									G	G	G										T	T	S		G	G	G							S								T	T										S
Template Predicted Secondary structure			.										.
Template SS confidence
		41		.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
					82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	G	H	E	F	S	V	I	A	T	P	.	G	H	T	L	G	H	I	C	Y	F	S	K	P	Y	L	F	C	G	D	T	L	F	S	G	G	C	G	R	L	F	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																												.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	Y	G	I	K	D	V	T	V	V	K	D	G	E	E	R	E	I	G	G	K	K	F	K	F	V	X	T	P	W	L	H	W	P	D	T	X	V	T	Y	L	D	G	I	L	F	S	C	D	V	G	G	G	Y	L	L	P	E	I	L	D	D	S	N	E	S	V	V	E	R	Y	L	P	H	V	T	K	Y	I
Template Known Secondary structure														T	T						T	T									T	T	S	S	S	T	T							T	T						T	T	T			S	S			S	S	S	B	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
								141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	T	A	S	Q	M	Y	Q	S	L	K	K	L	S	A	L	P	D	D	T	L	V	C	C	A	H	E	Y	T	L	S
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																			.
Template Conservation																										.
Template Sequence		V	T	V	I	G	H	Y	K	N	Y	I	L	E	G	A	E	K	L	S	S	L	K	I	K	.	A	L	L	P	G	H	G	L	I	W	K
Template Known Secondary structure						G	G	G												T	T	S			S	.					S	S	S		B	B	S
Template Predicted Secondary structure																										.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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