Job Description P0AC84 Confidence 99.93% Date Thu Jan 5 11:17:34 GMT 2012 Rank 28 Aligned Residues 164 % Identity 19% Template c1e5dA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin\:oxygen oxidoreductase; PDBTitle: rubredoxin oxygen:oxidoreductase (roo) from anaerobe2 desulfovibrio gigas Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.	.													.	.																																								.	.	.	.	.
Query SS confidence																					.	.	.													.	.																																								.	.	.	.	.
Query Sequence		N	Y	I	W	V	L	N	D	E	A	G	R	C	L	I	V	D	P	G	.	.	.	D	A	E	P	V	L	N	A	I	A	A	N	.	.	N	W	Q	P	E	A	I	F	L	T	H	H	H	H	D	H	V	G	G	V	K	E	L	V	E	K	F	P	Q	I	V	V	Y	G	P	Q	E	T	Q	.	.	.	.	.
Query Conservation																					.	.	.													.	.																																								.	.	.	.	.
Alig confidence			.									.	.								.	.	.													.	.																																								.	.	.	.	.
Template Conservation			.									.	.
Template Sequence		N	.	A	Y	L	V	E	D	E	K	.	.	T	T	L	F	D	T	V	K	A	E	Y	K	G	E	L	L	C	G	I	A	S	V	I	D	P	K	K	I	D	Y	L	V	I	Q	H	L	E	L	D	H	A	G	A	L	P	A	L	I	E	A	C	Q	P	E	K	I	F	T	S	S	L	G	Q	K	A	M	E	S
Template Known Secondary structure			.						S	S	S	.	.									G	G	G										T	T	S		G	G	G										S					T	T											S
Template Predicted Secondary structure			.									.	.
Template SS confidence
		36		.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
						82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																													.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																													.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	K	G	T	T	Q	V	V	K	D	G	E	T	A	F	V	L	G	H	E	F	S	V	I	A	T	P	G	.	H	T	L	G	H	I	C	Y	F	S	K	.	.	P	Y	L	F	C	G	D	T	L	F	S	G	G	C	G	R	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																													.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																													.												.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	H	Y	K	D	W	P	V	Q	V	V	K	H	G	E	T	L	S	L	G	K	R	T	V	T	F	Y	E	T	R	M	L	H	W	P	D	S	M	V	S	W	F	A	D	E	K	V	L	I	S	N	D	I	F	G	Q	N	I	A	A	S	E	R	F	S	D	Q	I	P	V	H	T	L	E	R	A	M	R	E
Template Known Secondary structure						S	S								T	T						S	S									T	T	S	S	S	T	T							T	T	T	T						T	T	T							S			B	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
								139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	E	G	T	A	S	Q	M	Y	Q	S	L	K	K	L	S	A	L	P	.	D	D	T	L	V	C	C	A	H	E	Y	T	L	S	N	M	K	F	A	L	S	I
Query Conservation		.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.																			.
Template Conservation
Template Sequence		Y	Y	A	N	I	V	N	P	Y	A	P	Q	T	L	K	A	I	E	T	L	V	G	A	G	V	A	P	E	F	I	C	P	D	H	G	V	I	F	R	G	A	D	Q	C	T	F	A
Template Known Secondary structure							T	G	G	G														T	T				S					S	S	S		B			S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions