|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | W | Q | D | L | H | H | S | E | L | S | V | S | Q | L | Y | A | L | L | Q | L | R | C | A | V | F | V | V | E | Q | N | C | P | Y | Q | D | I | D | G | D | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | G | D | N | R | H | I | L | G | W | K | N | D | E | L | V | A | Y | A | R | I | L | K | S | D | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | I | T | L | L | Y | P | A | L | K | Y | A | E | E | L | Y | L | L | I | N | Q | N | K | I | N | F | I | K | S | M | A | W | P | A | F | V | N | N | I | S | D | S | V | S | F | I | E | Q | S | M | I | D | N | Q | N | E | K | A | L | I | L | F | I | K | Y | K | T | K | I | A | G | V | V | S | F | N | I | I | D | H |
Template Known Secondary structure |   |
S |  |  |  |  |
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | G | G | G |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
. | . | . | . | . | . | 140 | . | |
|
. |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
| . | . | . |
|
|  |  |  |
|
|
| . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
| . |
. |
|
Query Sequence |   |
D | L | E | P | V | V | I | G | R | V | I | V | S | E | A | L | R | G | E | K | V | G | Q | Q | L | M | S | K | T | L | E | T | C | T | H | H | W | P | D | K | P | V | Y | L | G | A | . |
. |
. |
Q | A | H | L | Q | N | F | Y | Q | S | F | G | F | I | P | V | T | . |
. |
. |
E | V | Y | E | E | D | G | I | . |
. |
P |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
| . | . | . |
|   |   |   |   |   |
|   | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
A | N | K | T | A | Y | I | G | . |
Y | W | L | G | A | N | F | Q | G | K | G | I | V | T | N | A | I | N | K | L | I | Q | E | Y | G | D | S | G | V | I | K | R | F | V | I | K | C | I | V | D | N | K | K | S | N | A | T | A | L | R | C | G | F | T | L | E | G | V | L | Q | K | A | E | I | L | N | G | V | S | Y | D |
Template Known Secondary structure |   |
T | T | T |  |  |  |  |  | . |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
H | I | G | M | A | R | E | V |
Query Conservation |   |
  |
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
Template Sequence |   |
Q | N | I | Y | S | K | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . |
  |