Job Description Q46916 Confidence 2.00% Date Thu Jan 5 12:35:51 GMT 2012 Rank 40 Aligned Residues 93 % Identity 17% Template c3k3gA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:urea transporter; PDBTitle: crystal structure of the urea transporter from desulfovibrio vulgaris2 bound to 1,3-dimethylurea Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																		.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	W	I	V	V	M	L	F	I	V	T	S	F	N	Y	G	D	R	A	T	L	S	I	A	G	S	E	M	A	K	D	I	.	G	L	D	P	V	G	M	G	Y	V	F	S	A	F	S	.	.	.	.	.	.	.	.	.	.	.	W	A	Y	V	I	G	Q	I	P	G	G	W	L	L	D	R	F	G	S	K	R
Query Conservation																																		.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	L	G	V	C	A	V	L	G	T	A	A	S	T	L	T	A	Q	L	L	G	V	D	K	P	L	V	R	A	G	L	F	G	F	N	G	T	L	A	G	I	A	L	P	F	F	F	N	Y	E	P	A	M	L	G	Y	V	A	L	N	G	A	F	T	T	I	I	M	A	S	L	L	N	F	L	G	K	W	G
Template Known Secondary structure																							T								T	T	T	T	T														B				T	T																								G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	F	W	S	I	F	I	W	S	M	F	T	L	L	Q	G	F	V	D	I	F	S	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	A	L	T	A	P	F	V	L	A	T	W	L	L	M	F	G	V	Y	K	L	S	L	F
Template Known Secondary structure					T	T												G	G	G	G	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions