Job Description Q46916 Confidence 1.38% Date Thu Jan 5 12:35:51 GMT 2012 Rank 66 Aligned Residues 87 % Identity 15% Template c3j01A_ PDB info PDB header:ribosome/ribosomal protein Chain: A: PDB Molecule:preprotein translocase secy subunit; PDBTitle: structure of the ribosome-secye complex in the membrane environment Resolution 7.10 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	A	F	F	G	K	G	I	G	A	L	G	W	A	V	M	A	D	T	A	P	K	E	I	S	G	L	S	G	G	L	F	N	M	F	G	N	I	S	G	I	V	T	P	I	A	I	G	Y	I	V	G	T	T	G	S	F	N	G	A	L	I	Y	V	G	V	H	A	L	I	A	V	L	S	Y	L	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	T	A	V	V	S	L	V	T	G	T	M	F	L	M	W	L	G	E	Q	I	T	E	R	G	I	G	N	G	I	S	I	I	I	F	A	G	I	V	A	G	L	P	P	A	I	A	H	T	I	E	Q	A	R	Q	G	D	L	H	F	L	V	L	L	L	V	A	V	L	V	F	A	V	T	F	F	V	V	F
Template Known Secondary structure		T	T																				S	T	T	S			S	S	S													S	S	T	T	S	S	S				S	S	S	S	T	T	S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		436	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	I	K	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	R	G	Q	R	R
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions