Job Description Q46916 Confidence 1.34% Date Thu Jan 5 12:35:51 GMT 2012 Rank 68 Aligned Residues 90 % Identity 14% Template c2zqpY_ PDB info PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: crystal structure of secye translocon from thermus2 thermophilus Resolution 6.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	F	M	A	L	A	F	F	G	K	G	I	G	A	L	G	W	A	V	M	A	D	T	A	P	K	E	I	S	G	L	S	G	G	L	F	N	M	F	G	N	I	S	G	I	V	T	P	I	A	I	G	Y	I	V	G	T	T	G	S	F	N	G	A	L	I	Y	V	G	V	H	A	L	I	A	V	L	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	F	W	F	V	V	V	V	T	Q	V	A	G	I	A	L	L	L	W	M	A	E	R	I	T	E	Y	G	I	G	N	G	T	S	L	I	I	F	A	G	I	V	V	E	W	L	P	Q	I	L	R	T	I	G	L	I	R	T	G	E	V	N	L	V	A	F	L	F	F	L	A	F	I	V	L	A	F	A	G
Template Known Secondary structure														T	T															S	S	S													T	T	S	S													T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		433	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	V	G	D	I	K	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	A	A	V	Q	Q	A	E	R	R
Template Known Secondary structure							T			B
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions