 |
Job Description | P76261 | Confidence | 62.21% | Date | Thu Jan 5 12:21:20 GMT 2012 |
Rank | 190 | Aligned Residues | 96 |
% Identity | 13% | Template | d1ps9a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.20 |
|
 |
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | |
|
|
|
. | . | . | . | . | 460 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
V | D | Y | R | I | A | R | E | L | H | R | . |
. |
. |
. |
. |
. |
. |
K | N | V | K | L | A | I | D | D | F | G | T | G | N | S | S | F | S | . |
. |
. |
. |
. |
. |
. |
W | L | E | T | L | R | P | D | V | L | K | I | D | K | S | F | T | A | A | I | G | S | D | A | V | N | S | . |
. |
. |
. |
T | V | T | D | I | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . |   |
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |
|   | . | . | . | . | . | . | . |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | A | V | E | V | V | R | A | V | R | E | R | V | G | N | D | F | I | I | I | Y | R | L | S | M | L | D | L | V | E | D | G | G | T | F | A | E | T | V | E | L | A | Q | A | I | E | A | A | G | A | T | I | I | N | T | G | I | G | W | H | E | A | R | I | P | T | I | A | T | P | V | P | R | G | A | F | S | W | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |
|
| S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| B | T | T |
| S | S |
| S | S | S | T | T | S |
| T | T | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
461 | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | |
. | . | . | . | 480 | . | . | . | . | . | . | . | . | . | |
490 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
I | A | L | G | Q | R | L | N | I | E | L | V | A | E | G | . |
V | E | T | Q | E | Q | A | K | Y | L | R | R | H | G | . |
V | H | I | L | Q |
Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |
|
|
|
|
| . |
|
|   |   |   |
|   |   |   |
|   |   |   |
| . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|   |
|   |
Template Sequence |   |
R | K | L | K | G | H | V | S | L | P | L | V | T | T | N | R | I | N | D | P | Q | V | A | D | D | I | L | S | R | G | D | A | D | M | V | S |
Template Known Secondary structure |   |
 |  |  | T | T | S |
| S | S |
|  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|