Return to main results Retrieve Phyre Job Id

Job DescriptionP76261
Confidence78.36%DateThu Jan 5 12:21:20 GMT 2012
Rank92Aligned Residues65
% Identity17%Templated1ea9c3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   412.......420.... .....430.........440... ......
Predicted Secondary structure 








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Query Sequence  VKLAIDDFGTGNS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SFSWLETLRPDVLKIDKSF. . . . . . . . . . . . TAAIGS
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Template Sequence  YQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDP
Template Known Secondary structure 

STTS



S
S
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TT
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SSSSTTS
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T
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   450.........460.........470......
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Query Sequence  DAVNSTVTDIIIALGQRLNIELVAEGV
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Template Sequence  QFGDKDTLKKLVDLCHERGIRVLLDAV
Template Known Secondary structure  TT

TTTT


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   214.....220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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