Job Description P76261 Confidence 100.00% Date Thu Jan 5 12:21:20 GMT 2012 Rank 5 Aligned Residues 247 % Identity 30% Template c3s83A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef family protein; PDBTitle: crystal structure of eal domain from caulobacter crescentus cb15 Resolution 1.34 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	R	E	I	N	L	G	L	A	Q	H	E	F	E	L	F	C	Q	P	L	L	N	A	R	S	Q	Q	C	I	G	V	E	I	L	L	R	W	N	N	P	R	Q	G	W	I	S	P	D	V	F	I	P	I	A	E	E	H	H	L	I	V	P	L	T	R	Y	V	M	A	E	T	I	R	Q	R	H	V	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	D	L	R	G	A	I	G	R	G	E	I	T	P	Y	F	Q	P	I	V	R	L	S	T	G	A	L	S	G	F	E	A	L	A	R	W	I	H	P	R	R	G	X	L	P	P	D	E	F	L	P	L	I	E	E	X	G	L	X	S	E	L	G	A	H	X	X	H	A	A	A	Q	Q	L	S	T	W	R
Template Known Secondary structure													T	S											T	T	T															T	T	T					G	G	G	T							T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		349	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure					.	.	.	.																														.																						.	.
Query SS confidence					.	.	.	.																														.																						.	.
Query Sequence		M	S	S	.	.	.	.	Q	F	H	V	G	I	N	V	A	P	S	H	F	R	R	G	V	L	I	K	D	L	N	Q	Y	W	F	S	A	.	H	P	I	Q	Q	L	I	L	E	I	T	E	R	D	A	L	L	D	V	D	Y	.	.	R	I	A	R	E	L	H	R	K	N	V	K	L	A	I	D	D	F	G	T
Query Conservation					.	.	.	.																														.																						.	.
Alig confidence					.	.	.	.																														.																						.	.																				.
Template Conservation																																																																																	.
Template Sequence		A	A	H	P	A	X	G	N	L	T	V	S	V	N	L	S	T	G	E	I	D	R	P	G	L	V	A	D	V	A	E	T	L	R	V	N	R	L	P	R	G	A	L	K	L	E	V	T	E	S	D	I	X	R	D	P	E	R	A	A	V	I	L	K	T	L	R	D	A	G	A	G	L	A	L	D	D	F	F	.
Template Known Secondary structure					T	T												T	T	G	G	G	S	T	T												T	T			T	T	S																												T										.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	S	F	S	W	L	E	T	L	R	P	D	V	L	K	I	D	K	S	F	T	A	A	I	G	S	D	A	V	N	S	T	V	T	D	I	I	I	A	L	G	Q	R	L	N	I	E	L	V	A	E	G	V	E	T	Q	E	Q	A	K	Y	L	R	R	H	G	V	H	I	L	Q	G	Y	L	Y	A	Q	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	S	S	L	S	Y	L	T	R	L	P	F	D	T	L	K	I	D	R	Y	F	V	R	T	X	G	N	N	A	G	S	A	K	I	V	R	S	V	V	K	L	G	Q	D	L	D	L	E	V	V	A	E	G	V	E	N	A	E	X	A	H	A	L	Q	S	L	G	C	D	Y	G	Q	G	F	G	Y	A	P	A
Template Known Secondary structure		.	.									S															T	T	T																		T	T										S											T						B	T	T	T	B
Template Predicted Secondary structure		.	.
Template SS confidence
				453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	R	D	F	P	K	W	L	A	G	S	Q	P	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	P	Q	E	A	E	V	Y	L	N	E	A	Y	V	D	G
Template Known Secondary structure		B												S		B
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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