Job Description P76261 Confidence 23.89% Date Thu Jan 5 12:21:20 GMT 2012 Rank 354 Aligned Residues 103 % Identity 14% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	Y	R	I	A	R	E	L	H	R	K	N	V	K	L	A	I	D	D	F	G	T	G	N	S	S	F	S	W	L	E	T	L	R	P	D	V	L	K	I	D	K	S	F	T	A	A	I	G	S	D	A	V	N	S	T	V	T	D	I	I	I	A	L	G	Q	R	L	N	I	E	L	V	A	E	G	V	E
Query Conservation
Alig confidence																					.	.																						.	.	.	.	.	.																									.
Template Conservation																					.	.																						.	.	.	.	.	.																									.
Template Sequence		N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	.	.	A	T	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	.	.	.	.	.	.	D	V	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	.	L	F	L	T	A	R	D
Template Known Secondary structure														T	T						.	.		S	S														S					.	.	.	.	.	.					S	S												T	T						.						S	T
Template Predicted Secondary structure																					.	.																						.	.	.	.	.	.																									.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	Q	A	K	Y	L	R	R	H	G	V	H	I	L	Q	G	Y	L	Y	A	Q	P	M	P	L	R	D	F	P	K	W	L	A	G
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	.	.	.	.	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V
Template Known Secondary structure		T									T	S	T	T				.	.	.	.			S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions