 |
Job Description | P76261 | Confidence | 20.50% | Date | Thu Jan 5 12:21:20 GMT 2012 |
Rank | 379 | Aligned Residues | 61 |
% Identity | 20% | Template | c3lerA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:dihydrodipicolinate synthase; |
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168
|
Resolution | 1.84 Å |
|
 |
  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | |
|
|
|
. | . | . | . | . | . | . | 510 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | D | A | V | N | S | T | V | T | D | I | I | I | A | L | G | Q | R | L | N | I | E | L | V | A | E | G | V | . |
. |
. |
. |
. |
. |
E | T | Q | E | Q | A | K | Y | L | R | R | H | G | V | H | I | L | Q | G | Y | L | Y | A | Q | P | M | . |
. |
. |
. |
P | L | R | D | F | P | K | W | L | A | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
| . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   | . |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
| . | . | . |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
T | H | E | E | H | R | T | C | I | E | I | A | V | E | T | C | K | G | T | K | V | K | V | L | A | . |
G | A | G | S | N | A | T | H | E | A | V | G | L | A | K | F | A | K | E | H | G | A | D | . |
. |
. |
G | I | L | S | V | A | P | Y | Y | N | K | P | T | Q | Q | G | L | Y | E | H | Y | K | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  | . |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . |  |  |  |  |  |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|