Job Description P76261 Confidence 95.86% Date Thu Jan 5 12:21:20 GMT 2012 Rank 20 Aligned Residues 159 % Identity 8% Template c3ignA_ PDB info PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a Resolution 1.83 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	Q	A	A	K	L	Q	T	V	R	S	I	G	L	V	Q	D	G	T	L	Y	C	S	S	I	F	G	Y	R	N	V	P	V	V	D	I	L	A	E	L	P	A	P	Q	P	L	L	R	L	T	I	D	R	A	L	I	K	G	S	P	V	L	I	Q	W	T	P	A	A	G	S	S	N	A	G	V	M	E	M
Query Conservation
Alig confidence																																																																		.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		T	D	R	L	T	G	L	L	N	R	G	T	W	E	N	L	V	D	A	E	Y	E	R	F	R	R	Y	G	Q	A	T	S	L	V	X	F	D	I	D	H	F	K	P	V	N	D	T	Y	G	H	L	A	G	D	E	V	I	R	H	T	A	D	V	T	.	.	.	.	R	N	N	I	R	Q	S	D	S	A	G	R
Template Known Secondary structure		B		T	T	T		S																																T	T																									.	.	.	.		T	T	S		T	T	S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	I	D	L	L	T	A	M	L	L	E	P	Q	L	P	Q	I	S	S	A	S	L	T	V	D	K	R	H	L	L	Y	G	N	G	L	V	D	S	L	P	Q	P	E	D	N	E	N	Y	Q	V	S	S	Q	R	F	P	F	T	I	N	V	N	G	P	G	A	T	A	L	A	W	H	Y	L	P	T	Q	L	P
Query Conservation
Alig confidence																																																									.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		Y	G	G	E	E	F	G	I	I	L	P	E	T	D	A	E	S	A	R	V	I	C	E	R	I	R	E	A	I	E	K	S	T	V	S	T	S	A	G	D	I	Q	Y	T	V	S	X	G	I	A	Q	L	T	E	T	.	.	.	.	.	P	E	N	Y	X	Q	W	X	Q	K	A	D	E	A	L	Y	K	A	K	E
Template Known Secondary structure			S	S	S								T																			T						S	S																S		.	.	.	.	.		S	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	L	L	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	R	N	K	V	V	V
Template Known Secondary structure		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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