Job Description P76261 Confidence 97.02% Date Thu Jan 5 12:21:20 GMT 2012 Rank 15 Aligned Residues 206 % Identity 8% Template c3i5aA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae Resolution 2.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	F	I	S	Q	R	N	L	N	Q	Q	R	V	V	Q	F	A	N	H	A	V	E	E	L	D	K	V	L	L	P	L	Q	A	G	S	E	V	L	L	P	L	I	G	L	P	C	S	V	A	H	L	P	L	R	K	Q	A	A	K	L	Q	T	V	R	S	I	G	L	V	Q	D	G	T	L	Y	C	S	S	I
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	A	R	I	R	Y	H	S	R	S	Y	M	T	L	L	Q	R	D	E	A	Y	R	A	L	R	V	S	Q	Q	Q	L	L	D	T	N	L	V	L	Q	R	L	M	.	.	.	.	.	.	.	.	.	.	N	S	D	G	L	T	G	L	S	N	R	R	H	F	D	E	Y	L	E	L	E	W	R	R	A	T	R
Template Known Secondary structure																																													.	.	.	.	.	.	.	.	.	.	S	B		T	T	T		S	B
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	Y	R	N	V	P	V	V	D	I	L	A	E	L	P	A	P	Q	P	L	L	R	L	T	I	D	R	A	L	I	K	G	S	P	V	L	I	Q	W	T	P	A	A	G	S	S	N	A	G	V	M	E	M	I	N	I	D	L	L	T	A	M	L	L	E	P	Q	L	P	Q	I	S	S	A	S	L	T	V	D
Query Conservation
Alig confidence																																														.	.	.																																.	.
Template Conservation																																														.	.	.																																.	.
Template Sequence		D	Q	A	Q	L	S	L	L	M	I	D	V	D	Y	F	K	A	Y	N	D	N	F	G	H	L	E	G	D	E	A	L	R	Q	V	A	K	A	I	R	N	S	C	S	R	.	.	.	P	S	D	L	P	A	R	Y	G	G	E	E	F	A	M	V	L	P	N	T	S	P	G	G	A	R	L	L	A	E	K	.	.
Template Known Secondary structure			T											T	T																														S	.	.	.	T	T								T	T							T	T													.	.
Template Predicted Secondary structure																																														.	.	.																																.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	H	L	L	Y	G	N	G	L	V	D	S	L	P	Q	P	E	D	N	E	N	Y	Q	V	S	S	Q	R	F	P	F	T	I	N	V	N	G	P	G	A	T	A	L	A	W	H	Y	L	P	T	Q	L	P	L	A	V	L	L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	Q	S	V	A	G	M	N	I	P	H	I	A	P	V	P	G	S	S	L	T	V	S	I	G	V	A	T	V	T	P	Q	V	G	Q	H	S	R	Q	L	I	L	D	A	D	K	G	L	Y	L	A	K	N	N	G	R	N	Q	V	A
Template Known Secondary structure												B				S	S	T	T		B														T	T			T																T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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