Return to main results Retrieve Phyre Job Id

Job DescriptionP76261
Confidence95.70%DateThu Jan 5 12:21:20 GMT 2012
Rank21Aligned Residues157
% Identity10%Templatec3hvaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx ggdef domain from pseudomonas2 aeruginosa
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  RKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEM
Query Conservation              
         


  
                                                    
Alig confidence 





































































....





Template Conservation   
 



 

  
   
   
           

 
 
     

   
    
  
      
      ....     
Template Sequence  QDPVTGLYNRSHFLDLMDAAVQQAVTARKPSTLAYIHLNGYPSLQADHGLSGIDLLLGQLAGLMREQFGE. . . . EADLAR
Template Known Secondary structure  B
TTT
ST


TTGG....G
Template Predicted Secondary structure 
















....



Template SS confidence 















































































   269270.........280.........290.........300.........310.........320.........330........ .340....
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  INIDLLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHYLPTQLP
Query Conservation       
                                                                
  

  
  
Alig confidence 






















































.....



















Template Conservation       
 
                    
                


 
     .....      

  
  

  

 
Template Sequence  FGDSIFAALFKGKTPEQAQAALQRLLKKVENHLFELNGRSAQATLSIGVAGLDEK. . . . . TAKAQDVMNRAHRCADDAAR
Template Known Secondary structure 
SSST

T

TT



TT.....


T
Template Predicted Secondary structure 


























.....


Template SS confidence 















































































   345....350.........360.........370.........380.........390......... 400.........410.........
 
   247..250..
Predicted Secondary structure 


Query SS confidence 





Query Sequence  LAVLLS
Query Conservation        
Alig confidence 





Template Conservation   
 
 
Template Sequence  KGGSQI
Template Known Secondary structure  T
SS
Template Predicted Secondary structure 




Template SS confidence 





   420.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions