Job Description P76261 Confidence 100.00% Date Thu Jan 5 12:21:20 GMT 2012 Rank 4 Aligned Residues 340 % Identity 17% Template c3gfzB_ PDB info PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex Resolution 2.05 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	Y	R	N	V	P	V	V	D	I	L	A	E	L	P	A	P	Q	P	L	L	R	L	T	I	D	R	A	L	I	K	G	S	P	V	L	I	Q	W	T	.	P	A	A	G	S	S	N	A	G	V	M	E	M	I	N	I	D	L	L	T	A	M	L	L	E	P	Q	L	P	Q	I	S	S	A	S	L	T	V	D
Query Conservation																																										.
Alig confidence																					.	.																				.
Template Conservation																					.	.
Template Sequence		G	I	T	G	I	L	L	F	N	G	L	Q	F	F	Q	V	L	E	G	.	.	T	E	E	A	L	E	S	L	F	S	E	I	Q	S	D	P	R	H	R	D	V	V	E	L	M	R	D	Y	S	A	Y	R	R	F	H	G	T	G	M	R	I	L	D	L	R	L	F	E	T	D	G	A	L	E	E	I	L	R	F
Template Known Secondary structure		T									S	S									.	.														T		T	T													S	S		S			S	S	S						G	G	G			T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	H	L	L	Y	G	N	G	L	V	D	S	L	P	Q	P	E	D	N	E	N	Y	Q	V	S	S	Q	R	F	P	F	T	I	N	V	N	G	P	G	A	T	A	L	A	W	H	Y	L	P	T	Q	L	P	L	A	V	L	L	S	L	L	V	G	Y	I	A	W	L	A	T	A	Y	R	M	S	F	S	R	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	T	E	P	V	N	D	R	M	F	R	L	L	S	A	F	I	A	D	G	G	R	Y	C	L	P	E	.	.	.	.	.	.	P	L	Q	P	S	R	W	M	M	M
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S		G	G	G	S													G	G	G	G				G	.	.	.	.	.	.	G	G		G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		113	.																																		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		I	N	L	G	L	A	Q	H	E	F	E	L	F	C	Q	P	L	L	N	A	R	S	Q	Q	C	I	G	V	E	I	L	L	R	W	N	N	P	R	Q	.	G	W	I	S	P	D	V	F	I	P	I	A	E	E	H	H	L	I	V	P	L	T	R	Y	V	M	A	E	T	I	R	Q	R	H	V	F	P	M	S	S
Query Conservation																																									.
Alig confidence																																									.																															.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		A	P	Q	H	L	P	G	Q	P	C	Q	F	A	L	Q	A	I	V	E	P	A	K	K	R	V	S	S	F	E	A	L	I	R	S	P	T	G	G	S	P	V	E	M	F	A	A	I	A	A	E	D	R	Y	R	F	D	L	E	S	K	A	Y	A	F	A	L	A	G	Q	L	.	.	.	.	.	.	.	P	L	G
Template Known Secondary structure							T	T	S	S											T	T	T	T												T	T	S									T	S		G	G	G								T											T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.								230	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure															.																	.																						.	.
Query SS confidence															.																	.																						.	.
Query Sequence		Q	F	H	V	G	I	N	V	A	P	S	H	F	.	R	R	G	V	L	I	K	D	L	N	Q	Y	W	F	S	A	.	H	P	I	Q	Q	L	I	L	E	I	T	E	R	D	A	L	L	D	V	D	Y	.	.	R	I	A	R	E	L	H	R	K	N	V	K	L	A	I	D	D	F	G	T	G	N	S	S	F	S
Query Conservation															.																	.																						.	.
Alig confidence															.																	.																						.	.
Template Conservation
Template Sequence		K	H	Q	L	A	I	N	L	L	P	G	S	L	Y	H	H	P	D	A	V	G	W	L	M	D	S	L	L	A	A	G	L	R	P	D	Q	V	L	I	E	V	T	E	T	E	V	I	T	C	F	D	Q	F	R	K	V	L	K	A	L	R	V	A	G	M	K	L	A	I	D	D	F	G	A	G	Y	S	G	L	S
Template Known Secondary structure		S														S	S	S	S												T	T			G	G	G												T	T															T									T	S	S	S			S	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	E	T	L	R	P	D	V	L	K	I	D	K	S	F	T	A	A	I	G	S	D	A	V	N	S	T	V	T	D	I	I	I	A	L	G	Q	R	L	N	I	E	L	V	A	E	G	V	E	T	Q	E	Q	A	K	Y	L	R	R	H	G	V	H	I	L	Q	G	Y	L	Y	A	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	T	R	F	Q	P	D	K	I	K	V	D	A	E	L	V	R	D	I	H	I	S	G	T	K	Q	A	I	V	A	S	V	V	R	C	C	E	D	L	G	I	T	V	V	A	E	G	V	E	T	L	E	E	W	C	W	L	Q	S	V	G	I	R	L	F	Q	G	F	L	F	S	R	P
Template Known Secondary structure									S										T	T	G	G	G	B																		T										S										T	T						S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions