Job Description P76261 Confidence 97.83% Date Thu Jan 5 12:21:20 GMT 2012 Rank 12 Aligned Residues 175 % Identity 10% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	Q	A	G	S	E	V	L	L	P	L	I	G	L	P	C	S	V	A	H	L	P	L	R	K	Q	A	A	K	L	Q	T	V	R	S	I	G	L	V	Q	D	G	T	L	Y	C	S	S	I	F	G	Y	R	N	V	P	V	V	D	I	L	A	E	L	P	A	P	Q	P	L	L	R	L	T	I	D	R	A
Query Conservation
Alig confidence																																																																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		A	E	T	E	L	L	G	E	A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I	D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G	D	R
Template Known Secondary structure																											B		T	T	T		S	B																				T																				.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	I	K	G	S	P	V	L	I	Q	W	T	P	A	A	G	S	S	N	A	G	V	M	E	M	I	N	I	D	L	L	T	A	M	L	L	E	P	Q	L	P	Q	I	S	S	A	S	L	T	V	D	K	R	H	L	L	Y	G	N	G	L	V	D	S	L	P	Q	P	E	D	N	E	N	Y	Q	V	S	S	Q	.
Query Conservation																																																																																	.
Alig confidence													.	.	.	.																																													.	.	.	.	.	.	.	.													.
Template Conservation													.	.	.	.																																													.	.	.	.	.	.	.	.
Template Sequence		I	L	Q	L	V	A	E	T	I	T	S	.	.	.	.	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	S	A	.	.	.	.	.	.	.	.	R	X	V	P	V	T	A	S	I	G	V	A	Q
Template Known Secondary structure													.	.	.	.	T			T	T							S	S	S							S	S																					T	T	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure													.	.	.	.																																													.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.									.	.	.	.	.	.	.	300	.	.	.	.	.
				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	F	P	F	T	I	N	V	N	G	P	G	A	T	A	L	A	W	H	Y	L	P	T	Q	L	P	L	A	V	L	L	S	L	L
Query Conservation		.	.
Alig confidence		.	.				.
Template Conservation							.
Template Sequence		G	I	L	G	T	.	D	V	D	G	G	I	E	E	L	V	R	L	A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure						S	.																							S		S	S	S
Template Predicted Secondary structure							.
Template SS confidence
		306	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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